RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 SPATA13Q96N96 652 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CLSTN3Q9BQT9 956 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RHOJQ9H4E5 214 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 TAS2R3Q9NYW6 316 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GGA3Q9NZ52 723 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PLEKHA6Q9Y2H5 1048 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 WNK3Q9BYP7 1800 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PARP4Q9UKK3 1724 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 FAM95CA0A1B0GW59 222 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ENTPD3O75355 529 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SCELO95171 688 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ADRB2P07550 413 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RRASP10301 218 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 HOXA13P31271 388 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 HMGCLP35914 325 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SNAP25P60880 206 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 IRF9Q00978 393 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LRRC74AQ0VAA2 488 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SP140Q13342 867 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RAPSNQ13702 412 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 IL31Q6EBC2 164 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NAPEPLDQ6IQ20 393 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC26A9Q7LBE3 791 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ABI1Q8IZP0 508 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 Q8N402 240 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 FTMTQ8N4E7 242 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LPAR1Q92633 364 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PPM1MQ96MI6 270 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 MSTO1Q9BUK6 570 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 TEX12Q9BXU0 123 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GHITMQ9H3K2 345 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NT5DC2Q9H857 520 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SLAMF7Q9NQ25 335 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CLN6Q9NWW5 311 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LYARQ9NX58 379 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PDP1Q9P0J1 537 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 DNMT3BQ9UBC3 853 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 TBX20Q9UMR3 447 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GLYATL1P3A0A0U1RQE8 302 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 B4DXG7 233 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 TISP43B9A030 160 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NDUFA2O43678 99 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 IPO13O94829 963 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 DARSP14868 501 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ARSBP15848 533 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 POU3F3P20264 500 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PRKACGP22612 351 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GGT5P36269 586 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 FNTBP49356 437 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GLUD2P49448 558 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ATXN1P54253 815 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RBP5P82980 135 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CDH17Q12864 832 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NOL9Q5SY16 702 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 C6orf132Q5T0Z8 1188 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ANKS6Q68DC2 871 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF613Q6PF04 617 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GCNT7Q6ZNI0 430 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RASGRP3Q8IV61 690 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PLD6Q8N2A8 252 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 KIAA1958Q8N8K9 716 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GANCQ8TET4 914 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 DDX1Q92499 740 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GPRASP2Q96D09 838 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 C11orf54Q9H0W9 315 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF768Q9H5H4 540 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 AMBNQ9NP70 447 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RNF112Q9ULX5 631 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PTPRJQ12913 1337 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 NWD2Q9ULI1 1742 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 TRIM77I1YAP6 450 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 METTL18O95568 372 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 TRUB2O95900 331 aaKnown RBP8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 TPOP07202 933 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 CYP19A1P11511 503 aaPredicted RBP8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 CYP2F1P24903 491 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 PIK3CBP42338 1070 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 NUMBP49757 651 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 PPP1R8Q12972 351 aaKnown RBP8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 ORC1Q13415 861 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 KCTD2Q14681 263 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 CYP27C1Q4G0S4 372 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 TXNRD3NBQ6F5E7 133 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 USP45Q70EL2 814 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 PGAP1Q75T13 922 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 DET1Q7L5Y6 550 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 SPATA19Q7Z5L4 167 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 RNF130Q86XS8 419 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC41A1Q8IVJ1 513 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 NIPA2Q8N8Q9 360 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 GPR151Q8TDV0 419 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 MFSD3Q96ES6 412 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 PIP5K1AQ99755 562 aa8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 TINAGL1Q9GZM7 467 aaPredicted RBP8.01□□□□□ -1.13
CRNKL1-205ENST00000496549 DPAGT1Q9H3H5 408 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms