RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CHIT1Q13231 466 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 SGCGQ13326 291 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 SMAD4Q13485 552 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 KIAA1161Q6NSJ0 714 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 HACD2Q6Y1H2 254 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 LRRTM4Q86VH4 590 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 OXR1Q8N573 874 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 RNF148Q8N7C7 305 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 LMNTD1Q8N9Z9 388 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 NUDT8Q8WV74 236 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 SIPA1Q96FS4 1042 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 MED8Q96G25 268 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 LRCH3Q96II8 777 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ZIM2Q9NZV7 527 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 BRWD1Q9NSI6 2320 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 F5P12259 2224 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ANKRD12Q6UB98 2062 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 BBIP1A8MTZ0 92 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 E7EQ34 232 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 LMNAP02545 664 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC2A4P14672 509 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 XRCC1P18887 633 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 GNAZP19086 355 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 PPP2CBP62714 309 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 PPP2CAP67775 309 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 CYP20A1Q6UW02 462 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 HORMAD1Q86X24 394 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 RPLP0P6Q8NHW5 317 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 VPS33AQ96AX1 596 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC39A3Q9BRY0 314 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 NOP53Q9NZM5 478 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 POLR3HQ9Y535 204 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3DA0A087WVF3 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3IA0A087WXS9 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3EA0A087X179 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3FA6NER0 549 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3LB9A6J9 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 RSL1D1O76021 490 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3HP0C7X1 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 JUPP14923 745 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 CD72P21854 359 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 IGFALSP35858 605 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 HALP42357 657 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 GNPDA1P46926 289 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 CCR3P51677 355 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 RPL38P63173 70 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 CCINQ13939 588 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 KIAA0040Q15053 153 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 MAP7D1Q3KQU3 841 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 METRNLQ641Q3 311 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3GQ6DHY5 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3CQ6IPX1 549 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 FAM124AQ86V42 546 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 LRRC56Q8IYG6 542 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TBC1D3Q8IZP1 549 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 TSPEARQ8WU66 669 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SELENOMQ8WWX9 145 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 STMN2Q93045 179 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SERPINI1Q99574 410 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 GPATCH1Q9BRR8 931 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 ELOVL6Q9H5J4 265 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 LRTM1Q9HBL6 345 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 FZD3Q9NPG1 666 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SCML1Q9UN30 329 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 SNX6Q9UNH7 406 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 NDUFAF1Q9Y375 327 aa13.28□□□□□ -0.28
SPTBN1-205ENST00000496323 A0A1W2PP18 115 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 FXYD1O00168 92 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 ANGPT2O15123 496 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 UGDHO60701 494 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 YBX1P67809 324 aaKnown RBP13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 MS4A2Q01362 244 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 IRF8Q02556 426 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 PCDH1Q08174 1060 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 RPA4Q13156 261 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 DOC2AQ14183 400 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 CCDC85BQ15834 202 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 SMU1Q2TAY7 513 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 FRG2Q64ET8 278 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 PDZD3Q86UT5 571 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 PHC3Q8NDX5 983 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 ROPN1LQ96C74 230 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 FRG2BQ96QU4 278 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 PREBQ9HCU5 417 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 TMEM45AQ9NWC5 275 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 STX18Q9P2W9 335 aaKnown RBP13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 CROTQ9UKG9 612 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 FZD4Q9ULV1 537 aa13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 DNMT3AQ9Y6K1 912 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-205ENST00000496323 FAM234BA2RU67 622 aa13.27□□□□□ -0.29
SPTBN1-205ENST00000496323 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-205ENST00000496323 CEACAM5P06731 702 aa13.27□□□□□ -0.29
SPTBN1-205ENST00000496323 MYCLP1P12525 358 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-205ENST00000496323 NDUFV2P19404 249 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms