RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PCDHGA1Q9Y5H4 931 aa14.48□□□□□ -0.09
ACTB-213ENST00000493945 RNF215Q9Y6U7 377 aa14.48□□□□□ -0.09
ACTB-213ENST00000493945 PIPSLA2A3N6 862 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 STX16-NPEPL1H3BU86 382 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 AGPSO00116 658 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 STX16O14662 325 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 GIPC1O14908 333 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 H2AFYO75367 372 aaKnown RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 SASH3O75995 380 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PROS1P07225 676 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 NEFHP12036 1026 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 CSRP1P21291 193 aaKnown RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 ATP5F1P24539 256 aaPredicted RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 ALDH4A1P30038 563 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 RPA3P35244 121 aaPredicted RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 CAPZBP47756 277 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PGGT1BP53609 377 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 DLG1Q12959 904 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 OR4D1Q15615 310 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PHKG1Q16816 387 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 RASGRP3Q8IV61 690 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 CARFQ8N187 725 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PLD6Q8N2A8 252 aaKnown RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 PTERQ96BW5 349 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 MED8Q96G25 268 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 ATOH8Q96SQ7 321 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 CD180Q99467 661 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 PKP4Q99569 1192 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 MIPEPQ99797 713 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 HAUS8Q9BT25 410 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 UNKQ9C0B0 810 aaKnown RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 SYNDIG1Q9H7V2 258 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 RXFP3Q9NSD7 469 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 STOX2Q9P2F5 926 aaPredicted RBP14.47□□□□□ -0.09
ACTB-213ENST00000493945 ADAMTS6Q9UKP5 1117 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 ANGPTL3Q9Y5C1 460 aa14.47□□□□□ -0.09
ACTB-213ENST00000493945 GSAPA4D1B5 854 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 OR5K3A6NET4 321 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 NCF1BA6NI72 391 aaPredicted RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 NCF1CA8MVU1 366 aaPredicted RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 TK2O00142 265 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 PPM1DO15297 605 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 PLIN3O60664 434 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 SPAG7O75391 227 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 KATNA1O75449 491 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 RFPL3O75679 317 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 SLC16A8O95907 504 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 NCF1P14598 390 aaPredicted RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 NFKB2Q00653 900 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 TSTA3Q13630 321 aaPredicted RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 CYP2A13Q16696 494 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 HHATQ5VTY9 493 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 GUSBP11Q6P575 273 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 AGTRAPQ6RW13 159 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 LRRC70Q7Z2Q7 622 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 SPRED1Q7Z699 444 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 TRIM42Q8IWZ5 723 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 TBC1D19Q8N5T2 526 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 OR4E2Q8NGC2 313 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 PPP1R14CQ8TAE6 165 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 BAHD1Q8TBE0 780 aaPredicted RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 TCP10LQ8TDR4 215 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 PPP4R1Q8TF05 950 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 GPR78Q96P69 363 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 CCDC3Q9BQI4 270 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 TMEM216Q9P0N5 145 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 OPTCQ9UBM4 332 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 ICKQ9UPZ9 632 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 APOBEC2Q9Y235 224 aaKnown RBP14.46□□□□□ -0.09
ACTB-213ENST00000493945 BTBD3Q9Y2F9 522 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 DYRK1BQ9Y463 629 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 PCDHB11Q9Y5F2 797 aa14.46□□□□□ -0.09
ACTB-213ENST00000493945 TMEM120BA0PK00 339 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 OR6C74A6NCV1 312 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 ISM1B1AKI9 464 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 TMX2-CTNND1H3BSU7 103 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 UBXN8O00124 270 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 SLC30A4O14863 429 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 TYROBPO43914 113 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 GDF9O60383 454 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 STK16O75716 305 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 CPNE6O95741 557 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 ERGP11308 486 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 CPA3P15088 417 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 HRH2P25021 359 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 IMPA1P29218 277 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 OAS2P29728 719 aaKnown RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 CMPK1P30085 196 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 HPDP32754 393 aaPredicted RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 ABATP80404 500 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 SPIDRQ14159 915 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 SETDB1Q15047 1291 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 TRIP6Q15654 476 aaKnown RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 PFKFB4Q16877 469 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 CFAP157Q5JU67 520 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 PRAMEF13Q5VWM6 474 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 CYB5D1Q6P9G0 228 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 ZYG11AQ6WRX3 759 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms