RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 OR4D9Q8NGE8 314 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TSPAN17Q96FV3 270 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 PRR11Q96HE9 360 aaPredicted RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 TGM7Q96PF1 710 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 NRTNQ99748 197 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 XKR8Q9H6D3 395 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 HRASLS2Q9NWW9 162 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 SLC39A10Q9ULF5 831 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 MTO1Q9Y2Z2 717 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 VWA7Q9Y334 891 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 COL12A1Q99715 3063 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 KRT87PA6NCN2 255 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 A8MU76 341 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 ARHGEF33A8MVX0 844 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 BTN3A1O00481 513 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 RASSF9O75901 435 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 MATN4O95460 622 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 C1orf105O95561 183 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 INHBAP08476 426 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 ABHD2P08910 425 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 ZNF37AP17032 561 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 POLR2CP19387 275 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 CD9P21926 228 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 MAP4P27816 1152 aaKnown RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 PKLRP30613 574 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 TAS2R39P59534 338 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 VSNL1P62760 191 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 POU4F1Q01851 419 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 CLN3Q13286 438 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 EIF3IQ13347 325 aaKnown RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 SQSTM1Q13501 440 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 USP10Q14694 798 aaKnown RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 ERCC6LQ2NKX8 1250 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 ZNF574Q6ZN55 896 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 FAM92BQ6ZTR7 304 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 TAX1BP1Q86VP1 789 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 AMIGO1Q86WK6 493 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 RAB42Q8N4Z0 105 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 RCBTB1Q8NDN9 531 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 MAGEC3Q8TD91 643 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 EEF1AKMT1Q8WVE0 214 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 RAD51AP1Q96B01 352 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 LIN37Q96GY3 246 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 CCNL2Q96S94 520 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 GPR22Q99680 433 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 MCMBPQ9BTE3 642 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 RAB11FIP5Q9BXF6 653 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 CAB39LQ9H9S4 337 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 AKAP7Q9P0M2 348 aaPredicted RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 IKBKGQ9Y6K9 419 aa11.23□□□□□ -0.61
CTSA-209ENST00000493522 MDC1Q14676 2089 aaKnown RBP11.23□□□□□ -0.61
CTSA-209ENST00000493522 PMS2P1A4D2B8 440 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PABPN1LA6NDY0 278 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 POC1B-GALNT4F8VUJ3 575 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 MATN2O00339 956 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 BTN3A3O00478 584 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PLD2O14939 933 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PHGDHO43175 533 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 RIPK2O43353 540 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PSIP1O75475 530 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 WISP1O95388 367 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 SYF2O95926 243 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 C9P02748 559 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 RAB28P51157 221 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 IL2P60568 153 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 ZFP36L1Q07352 338 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 TRA2AQ13595 282 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTSA-209ENST00000493522 BMPR2Q13873 1038 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 C16orf72Q14CZ0 275 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 CCSMST1Q4G0I0 132 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 UBE2R2Q712K3 238 aaPredicted RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 TAOK1Q7L7X3 1001 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PRICKLE2Q7Z3G6 844 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 CEP97Q8IW35 865 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 UBLCP1Q8WVY7 318 aaPredicted RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTSA-209ENST00000493522 ZDHHC12Q96GR4 267 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 IL17FQ96PD4 163 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PAFAH2Q99487 392 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 TXLNGYQ9BZA5 131 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 POPDC3Q9HBV1 291 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 LOXL2Q9Y4K0 774 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 PCDHGA7Q9Y5G6 932 aa11.22□□□□□ -0.61
CTSA-209ENST00000493522 HEMK1Q9Y5R4 338 aaPredicted RBP11.22□□□□□ -0.61
CTSA-209ENST00000493522 PIPSLA2A3N6 862 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 NPEPPSL1A6NEC2 478 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 TLCD2A6NGC4 264 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 C2orf74A8MZ97 194 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 PYCARD-AS1I3L0S3 204 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 HAX1O00165 279 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 RASGRF2O14827 1237 aa11.21□□□□□ -0.61
CTSA-209ENST00000493522 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
CTSA-209ENST00000493522 KIF1CO43896 1103 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms