RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LGALS12Q96DT0 336 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 MRPL38Q96DV4 380 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ALG14Q96F25 216 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF583Q96ND8 569 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 GAD1Q99259 594 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 LITAFQ99732 161 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 EIF2AK1Q9BQI3 630 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 HAUS8Q9BT25 410 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 FGFBP2Q9BYJ0 223 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 POMKQ9H5K3 350 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TBC1D13Q9NVG8 400 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ALKBH4Q9NXW9 302 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SUCLA2Q9P2R7 463 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TINAGQ9UJW2 476 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 PADI1Q9ULC6 663 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 AMDHD2Q9Y303 409 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ZFC3H1O60293 1989 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 COL5A1P20908 1838 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 KDM3AQ9Y4C1 1321 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 LRRIQ4A6NIV6 560 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 C2CD4DB7Z1M9 353 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 M0QZ92 97 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PTGESO14684 152 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CREB3O43889 395 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 NEMFO60524 1076 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 N4BP1O75113 896 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 STAM2O75886 525 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 SLITRK3O94933 977 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ETFAP13804 333 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ITGA2P17301 1181 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ARF4P18085 180 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 S1PR1P21453 382 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 RRM1P23921 792 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CASP1P29466 404 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 YWHABP31946 246 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 BRCC3P46736 316 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CRYBB1P53674 252 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 RAD23BP54727 409 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 SETQ01105 290 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CEBPZQ03701 1054 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 MBTD1Q05BQ5 628 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 LAMTOR4Q0VGL1 99 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PPP2R5CQ13362 524 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 TRIM14Q14142 442 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CCNYL2Q5T2Q4 361 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 LCTLQ6UWM7 567 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 SLC36A4Q6YBV0 504 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF852Q6ZMS4 543 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 KCTD8Q6ZWB6 473 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 MTSS1LQ765P7 747 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 TAOK1Q7L7X3 1001 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 NIPA1Q7RTP0 329 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CATSPER4Q7RTX7 472 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PLPPR4Q7Z2D5 763 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 TICAM2Q86XR7 235 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 FOXRED2Q8IWF2 684 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 DAW1Q8N136 415 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 SLC39A11Q8N1S5 342 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 TMTC2Q8N394 836 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 RNF149Q8NC42 400 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PRSS33Q8NF86 280 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CADM4Q8NFZ8 388 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 OR10V1Q8NGI7 309 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CEP70Q8NHQ1 597 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PHOSPHO2Q8TCD6 241 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PRPF31Q8WWY3 499 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ING5Q8WYH8 240 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 STAMQ92783 540 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ANKRD9Q96BM1 317 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 FBXL8Q96CD0 374 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF274Q96GC6 653 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 SLC39A13Q96H72 371 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 CEP170P1Q96L14 293 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 MAP7D2Q96T17 732 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 RASSF1Q9NS23 344 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 RGS18Q9NS28 235 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 HCFC1R1Q9NWW0 138 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 MAP3K20Q9NYL2 800 aaKnown RBP3.03□□□□□ -1.92
PTCD3-218ENST00000493430 PNMA2Q9UL42 364 aa3.03□□□□□ -1.92
PTCD3-218ENST00000493430 F5P12259 2224 aa3.03□□□□□ -1.93
PTCD3-218ENST00000493430 GON4LQ3T8J9 2241 aa3.03□□□□□ -1.93
PTCD3-218ENST00000493430 FAM186AA6NE01 2351 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 SPTBN2O15020 2390 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PLXNB3Q9ULL4 1909 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 IGKV6-21A0A0C4DH24 114 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-218ENST00000493430 RRN3P2A6NIE6 340 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 EXTL3O43909 919 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 MMP2P08253 660 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 OR4Q2P0C623 313 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 G6PDP11413 515 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PAX1P15863 534 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 GJA1P17302 382 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CAPN2P17655 700 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 PSMA5P28066 241 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 GJB2P29033 226 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 GNA11P29992 359 aa3.02□□□□□ -1.93
PTCD3-218ENST00000493430 CCT6AP40227 531 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms