RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	ISLR2	Q6UXK2	745 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	C15orf39	Q6ZRI6	1047 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	CLEC17A	Q6ZS10	378 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	RUFY3	Q7L099	469 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	LINGO2	Q7L985	606 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	GSTA5	Q7RTV2	222 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	IQCH	Q86VS3	1027 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	NBPF5P	Q86XG9	351 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	DZIP1	Q86YF9	867 aa	Known RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	SLC35F3	Q8IY50	421 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	C1orf87	Q8N0U7	546 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	FBXW8	Q8N3Y1	598 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	NHLRC2	Q8NBF2	726 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	RBM15B	Q8NDT2	890 aa	Known RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	ZNF248	Q8NDW4	579 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	MCU	Q8NE86	351 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	FAM76A	Q8TAV0	307 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	PSPC1	Q8WXF1	523 aa	Known RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	GTF3C6	Q969F1	213 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	ZKSCAN4	Q969J2	545 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	ARSG	Q96EG1	525 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	OR2A14	Q96R47	310 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	MTERF1	Q99551	399 aa	Known RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	CMKLR1	Q99788	373 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	GPR88	Q9GZN0	384 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	DPH5	Q9H2P9	285 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	PLK3	Q9H4B4	646 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	NCOR1P1	Q9H4R4	102 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	FKRP	Q9H9S5	495 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	C20orf141	Q9NUB4	165 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	HOXC10	Q9NYD6	342 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	SEPT10	Q9P0V9	454 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	DLGAP2	Q9P1A6	1054 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	CRNN	Q9UBG3	495 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	HAO1	Q9UJM8	370 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	WDR37	Q9Y2I8	494 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	C2CD2	Q9Y426	696 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	LSM4	Q9Y4Z0	139 aa	Known RBP	3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	CLCA3P	Q9Y6N3	262 aa		3.15	□□□□□ -1.91
VPS36-205	ENST00000492650	SMCHD1	A6NHR9	2005 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650		A0A0B4J203	849 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	IGKV3D-20	A0A0C4DH25	116 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	CTAGE9	A4FU28	777 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	LRRC72	A6NJI9	287 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650		O00370	1275 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	SLC30A4	O14863	429 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	WDR1	O75083	606 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	NDUFS3	O75489	264 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	MT-CYB	P00156	380 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	GBA	P04062	536 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TOP1	P11387	765 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	GZMA	P12544	262 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	PDGFRA	P16234	1089 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TMEM11	P17152	192 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ARF4	P18085	180 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	CORO1A	P31146	461 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	MAGEA4	P43358	317 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ARCN1	P48444	511 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TRPC1	P48995	793 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	HOXA1	P49639	335 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	METAP2	P50579	478 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	RAD23B	P54727	409 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	HNRNPH2	P55795	449 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	NME5	P56597	212 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ACTR1A	P61163	376 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ISL1	P61371	349 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	CCNA1	P78396	465 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	PPIG	Q13427	754 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	GTF2H2	Q13888	395 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	RRS1	Q15050	365 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	C2orf68	Q2NKX9	166 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ZNF876P	Q49A33	203 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	SFMBT2	Q5VUG0	894 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	GTF2H2C	Q6P1K8	395 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	FIP1L1	Q6UN15	594 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	LCTL	Q6UWM7	567 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	CEACAM20	Q6UY09	585 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	CFAP77	Q6ZQR2	320 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	C15orf52	Q6ZUT6	534 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	KCTD9	Q7L273	389 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	AACS	Q86V21	672 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	MYPOP	Q86VE0	399 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TDRP	Q86YL5	185 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	KLHL7	Q8IXQ5	586 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	GUF1	Q8N442	669 aa	Known RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	SPATA6L	Q8N4H0	392 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	AFAP1	Q8N556	730 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ZBTB2	Q8N680	514 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TSPAN14	Q8NG11	270 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	NEK11	Q8NG66	645 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	OR10V1	Q8NGI7	309 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TEKT4	Q8WW24	435 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	SLC5A11	Q8WWX8	675 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	SGCD	Q92629	289 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ZNF75CP	Q92670	426 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	TEKT1	Q969V4	418 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	ELMOD3	Q96FG2	381 aa		3.14	□□□□□ -1.91
VPS36-205	ENST00000492650	KCNK16	Q96T55	309 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms