RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	PABPC1	P11940	636 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SRC	P12931	536 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	NCF1	P14598	390 aa	Predicted RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	JUP	P14923	745 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RPL17	P18621	184 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	GGT1	P19440	569 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CAPN3	P20807	821 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CXCR2	P25025	360 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	DPP6	P42658	865 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RPS9	P46781	194 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	DIO3	P55073	304 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	UFM1	P61960	85 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RPS14	P62263	151 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LMAN2	Q12907	356 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	TRAF3	Q13114	568 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RPA4	Q13156	261 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LSAMP	Q13449	338 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	VEZF1	Q14119	521 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	GBX1	Q14549	363 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CHRNA6	Q15825	494 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ZBED5	Q49AG3	693 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ZNF805	Q5CZA5	627 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CCNYL2	Q5T2Q4	361 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LRIF1	Q5T3J3	769 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RNF220	Q5VTB9	566 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	AP1AR	Q63HQ0	302 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	FRG2	Q64ET8	278 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	TXNDC8	Q6A555	127 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CRTC1	Q6UUV9	634 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LAYN	Q6UX15	382 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	UNC5D	Q6UXZ4	953 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LINGO4	Q6UY18	593 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RNF111	Q6ZNA4	994 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	FAM92B	Q6ZTR7	304 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	EP400NL	Q6ZTU2	488 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	GPR141	Q7Z602	305 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	TMEM150A	Q86TG1	271 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SPPL2C	Q8IUH8	684 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CHERP	Q8IWX8	916 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	LILRA2	Q8N149	483 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RNF148	Q8N7C7	305 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	BEND7	Q8N7W2	519 aa	Predicted RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	DDHD1	Q8NEL9	900 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	TMIE	Q8NEW7	156 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	OR8J2	Q8NGG1	315 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	DNAJB14	Q8TBM8	379 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SLC22A17	Q8WUG5	538 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SELENOM	Q8WWX9	145 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	GLMN	Q92990	594 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	MTERF3	Q96E29	417 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	FAM120B	Q96EK7	910 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SCLY	Q96I15	445 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	REXO5	Q96IC2	774 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	EXOC2	Q96KP1	924 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	KLHL32	Q96NJ5	620 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	QRFPR	Q96P65	431 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	FRG2B	Q96QU4	278 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	OR52E6	Q96RD3	313 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ZIC5	Q96T25	663 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ACOX2	Q99424	681 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RAD9A	Q99638	391 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	C17orf80	Q9BSJ5	609 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ADI1	Q9BV57	179 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CHID1	Q9BWS9	393 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	PCBD2	Q9H0N5	130 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	PCDHAC1	Q9H158	963 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CLMP	Q9H6B4	373 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	EPS8L2	Q9H6S3	715 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RC3H2	Q9HBD1	1191 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	IL23A	Q9NPF7	189 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	THG1L	Q9NWX6	298 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CMTM6	Q9NX76	183 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SIRT5	Q9NXA8	310 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SMPD4	Q9NXE4	827 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	THUMPD1	Q9NXG2	353 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	PGPEP1	Q9NXJ5	209 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	OBP2A	Q9NY56	170 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	USE1	Q9NZ43	259 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	VPS29	Q9UBQ0	182 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	RSL24D1	Q9UHA3	163 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	EIF2B4	Q9UI10	523 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CNOT6	Q9ULM6	557 aa	Known RBP	6.19	□□□□□ -1.42
FN1-223	ENST00000490833	PCDHGB4	Q9UN71	923 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	GPR34	Q9UPC5	381 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ERVW-1	Q9UQF0	538 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	INVS	Q9Y283	1065 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	SLC27A6	Q9Y2P4	619 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	ZNF451	Q9Y4E5	1061 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	MAP4K5	Q9Y4K4	846 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	TIMM22	Q9Y584	194 aa		6.19	□□□□□ -1.42
FN1-223	ENST00000490833	CCDC160	A6NGH7	325 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833	TRIM64C	A6NLI5	447 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833	UPK3BL1	B0FP48	263 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833	UPK3BL2	E5RIL1	263 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833		G3V2T6	193 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833	FXYD1	O00168	92 aa		6.18	□□□□□ -1.42
FN1-223	ENST00000490833	FOXE1	O00358	373 aa	Predicted RBP	6.18	□□□□□ -1.42
FN1-223	ENST00000490833	OR7A17	O14581	309 aa		6.18	□□□□□ -1.42

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