RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CTBP1Q13363 440 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 HSP90AA5PQ58FG0 334 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 SPANXN3Q5MJ09 141 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 BORAQ6PGQ7 559 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 CNSTQ6PJW8 725 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 TRIM73Q86UV7 250 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 PTRH1Q86Y79 214 aaKnown RBP13.04□□□□□ -0.32
LMO4-203ENST00000489303 DENND6AQ8IWF6 608 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 OR2L8Q8NGY9 312 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 CLIP3Q96DZ5 547 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 SNF8Q96H20 258 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 FBXO6Q9NRD1 293 aaPredicted RBP13.04□□□□□ -0.32
LMO4-203ENST00000489303 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 IARS2Q9NSE4 1012 aaKnown RBP13.04□□□□□ -0.32
LMO4-203ENST00000489303 SPHK1Q9NYA1 384 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 IL17BQ9UHF5 180 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
LMO4-203ENST00000489303 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 TTI1O43156 1089 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 SUV39H1O43463 412 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 HBQ1P09105 142 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 PRKAR1AP10644 381 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 ARL4CP56559 192 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 RPS15P62841 145 aaKnown RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 CDC20Q12834 499 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 DNASE1L3Q13609 305 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 CRYMQ14894 314 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 ATP1A1-AS1Q5TC04 95 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 UGT3A1Q6NUS8 523 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 SEC14L1Q92503 715 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 KCNJ9Q92806 393 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 MR1Q95460 341 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 LRFN5Q96NI6 719 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 KRT12Q99456 494 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 GPR87Q9BY21 358 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 CHRNA10Q9GZZ6 450 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 ACTR5Q9H9F9 607 aaPredicted RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 PPANQ9NQ55 473 aaKnown RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 IRAK4Q9NWZ3 460 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 CIDEBQ9UHD4 219 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
LMO4-203ENST00000489303 NFS1Q9Y697 457 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 PIKFYVEQ9Y2I7 2098 aa13.03□□□□□ -0.32
LMO4-203ENST00000489303 ZNF839A8K0R7 811 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 VPS26AO75436 327 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 FKBP9O95302 570 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 CATP04040 527 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 ENO3P13929 434 aaPredicted RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 IVDP26440 423 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 CCR10P46092 362 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 BDKRB1P46663 353 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 ITGA8P53708 1063 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 HIF1AQ16665 826 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 KLHL38Q2WGJ6 581 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 ZNF789Q5FWF6 425 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 HIBCHQ6NVY1 386 aaPredicted RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 CDHR3Q6ZTQ4 885 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
LMO4-203ENST00000489303 C2orf73Q8N5S3 287 aaPredicted RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 CT55Q8WUE5 264 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 INPP5DQ92835 1189 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 IL17FQ96PD4 163 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 TRIM51Q9BSJ1 452 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 RUVBL2Q9Y230 463 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 PCDHGA6Q9Y5G7 932 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 MRPS18BQ9Y676 258 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 AP1M2Q9Y6Q5 423 aa13.02□□□□□ -0.33
LMO4-203ENST00000489303 TLN1Q9Y490 2541 aaKnown RBP13.02□□□□□ -0.33
LMO4-203ENST00000489303 FAM187AA6NFU0 413 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 MEN1O00255 615 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 OR2B3O76000 313 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 HAUS5O94927 633 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
LMO4-203ENST00000489303 MATN4O95460 622 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 CBSLP0DN79 551 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 ERVK-10P10266 1014 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 AGXTP21549 392 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 F8A1P23610 371 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 OAS2P29728 719 aaKnown RBP13.01□□□□□ -0.33
LMO4-203ENST00000489303 PEBP1P30086 187 aaKnown RBP13.01□□□□□ -0.33
LMO4-203ENST00000489303 CBSP35520 551 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 HSD17B2P37059 387 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 ELK3P41970 407 aa13.01□□□□□ -0.33
LMO4-203ENST00000489303 CARSP49589 748 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms