RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 FAM45BPQ6NSW5 357 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 UGT3A1Q6NUS8 523 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 TTC23LQ6PF05 361 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 CEACAM20Q6UY09 585 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 CYHR1Q6ZMK1 362 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 LRRC69Q6ZNQ3 347 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 STRA8Q7Z7C7 330 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 DTX1Q86Y01 620 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 LRRN4CLQ8ND94 238 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 FAM45AQ8TCE6 357 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 TRAPPC9Q96Q05 1148 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 RAB11FIP5Q9BXF6 653 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 FAM129AQ9BZQ8 928 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 KLHL25Q9H0H3 589 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 SOHLH2Q9NX45 425 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 NSMCE4AQ9NXX6 385 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 SPATA7Q9P0W8 599 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 SLC39A10Q9ULF5 831 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 PCDHB11Q9Y5F2 797 aa15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 SNRNP200O75643 2136 aaKnown RBP15.47■□□□□ 0.07
ERGIC3-216ENST00000488384 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 MYO1CO00159 1063 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 KLK10O43240 276 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 TSPAN12O95859 305 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 CATP04040 527 aaKnown RBP15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 ERGP11308 486 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 FGF5P12034 268 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 SKIV2L2P42285 1042 aaKnown RBP15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 SLC5A12Q1EHB4 618 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 PAQR3Q6TCH7 311 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 C3orf62Q6ZUJ4 267 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 CYS1Q717R9 158 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 C2orf73Q8N5S3 287 aaPredicted RBP15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 FBXO15Q8NCQ5 510 aaPredicted RBP15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 HMGCLL1Q8TB92 370 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 MAGEC3Q8TD91 643 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 ASB11Q8WXH4 323 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 RNF31Q96EP0 1072 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 VPS39Q96JC1 886 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 ZPBPQ9BS86 351 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 DPH1Q9BZG8 443 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 SPRY4Q9C004 299 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 RHOJQ9H4E5 214 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 VWA7Q9Y334 891 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 PTPRQQ9UMZ3 2332 aa15.46■□□□□ 0.07
ERGIC3-216ENST00000488384 SMG1Q96Q15 3661 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 A0A0J9YY10 115 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 FAM95CA0A1B0GW59 222 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 ISM1B1AKI9 464 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 GFYI3L273 518 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 ACY1Q03154 408 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 PDAP1Q13442 181 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 IL11RAQ14626 422 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 GPR19Q15760 415 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 ZIC1Q15915 447 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 CYP2A13Q16696 494 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 UBAP2Q5T6F2 1119 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 LRRC8EQ6NSJ5 796 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 FAM20CQ8IXL6 584 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 C19orf47Q8N9M1 422 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 OR9A1PQ8NGU1 263 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 EEF1AKMT1Q8WVE0 214 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 HNRNPLLQ8WVV9 542 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 CDKL2Q92772 493 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 LINGO1Q96FE5 620 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 ELMO2Q96JJ3 720 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 BBC3Q96PG8 261 aaPredicted RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 L2HGDHQ9H9P8 463 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 FGF21Q9NSA1 209 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 MTRF1LQ9UGC7 380 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 RARRES3Q9UL19 164 aa15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 TMEM184BQ9Y519 407 aaPredicted RBP15.45■□□□□ 0.06
ERGIC3-216ENST00000488384 A0A1W2PPV9 198 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 PRICKLE3O43900 615 aaPredicted RBP15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 SPAG6O75602 509 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 STK17BO94768 372 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 TIAF1O95411 115 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 DLGAP3O95886 979 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 MSL3P1P0C860 447 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 ZNF28P17035 718 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 PSMB5P28074 263 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 STX2P32856 288 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 RGS4P49798 205 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 TAS2R39P59534 338 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 TUBB4BP68371 445 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 SRSF6Q13247 344 aaKnown RBP15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 FASTKQ14296 549 aaKnown RBP15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 ZNF460Q14592 562 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■■■ 33.5
ERGIC3-216ENST00000488384 KBTBD12Q3ZCT8 623 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 TMTC4Q5T4D3 741 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 CYB5D1Q6P9G0 228 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 CDHR3Q6ZTQ4 885 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 UBE2R2Q712K3 238 aaPredicted RBP15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 PPP1R3BQ86XI6 285 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 RELL1Q8IUW5 271 aa15.44■□□□□ 0.06
ERGIC3-216ENST00000488384 RAB42Q8N4Z0 105 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms