RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	EURL	Q9NYK6	297 aa		11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	DHCR7	Q9UBM7	475 aa	Known RBP	11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	CIDEB	Q9UHD4	219 aa		11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	VPS4A	Q9UN37	437 aa		11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	CDYL	Q9Y232	598 aa		11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	KLHL20	Q9Y2M5	609 aa		11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	PTRH2	Q9Y3E5	179 aa	Known RBP	11.99	□□□□□ -0.49
SREBF1-215	ENST00000487401	RASGRF2	O14827	1237 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	PFDN6	O15212	129 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	CEACAM4	O75871	244 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	S1PR4	O95977	384 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	CTSB	P07858	339 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	MAG	P20916	626 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	MGAT1	P26572	445 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	NMBR	P28336	390 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	KCNJ1	P48048	391 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	CD97	P48960	835 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	CDK16	Q00536	496 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	NADK2	Q4G0N4	442 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	MRNIP	Q6NTE8	343 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	TAX1BP1	Q86VP1	789 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	HPS6	Q86YV9	775 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	FAM26E	Q8N5C1	309 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	LINC01555	Q8NAE3	123 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	FDCSP	Q8NFU4	85 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	OR2L8	Q8NGY9	312 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	CPT1C	Q8TCG5	803 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	DENND1A	Q8TEH3	1009 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	DLG3	Q92796	817 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	FER1L6-AS2	Q96M78	137 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	FOPNL	Q96NB1	174 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	IL17F	Q96PD4	163 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	RAB11FIP5	Q9BXF6	653 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	MFRP	Q9BY79	579 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	TREX1	Q9NSU2	369 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	GPR83	Q9NYM4	423 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	ANKMY1	Q9P2S6	941 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401	MRFAP1	Q9Y605	127 aa		11.98	□□□□□ -0.49
SREBF1-215	ENST00000487401		H3BMH7	237 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	NRDC	O43847	1150 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	KLHL41	O60662	606 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	KLF7	O75840	302 aa	Predicted RBP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	VAPB	O95292	243 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	PIM1	P11309	404 aa	Predicted RBP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	RPS3	P23396	243 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	FMO4	P31512	558 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	TERF1	P54274	439 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	ARSF	P54793	590 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	EIF3B	P55884	814 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	SARNP	P82979	210 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	RAPSN	Q13702	412 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	SLC9A5	Q14940	896 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	LRRC8B	Q6P9F7	803 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	FIGLA	Q6QHK4	219 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	CES3	Q6UWW8	571 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	ZNF662	Q6ZS27	426 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	MRGPRE	Q86SM8	312 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	LMNTD1	Q8N9Z9	388 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	CLEC1A	Q8NC01	280 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	TRIM58	Q8NG06	486 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	OR2Y1	Q8NGV0	311 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	MAGEC3	Q8TD91	643 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	RAD51AP1	Q96B01	352 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	PTER	Q96BW5	349 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	KIFC1	Q9BW19	673 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	NUDT9	Q9BW91	350 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	P2RY12	Q9H244	342 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	MRM3	Q9HC36	420 aa	Known RBP	11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	SLAMF7	Q9NQ25	335 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	HECTD1	Q9ULT8	2610 aa		11.97	□□□□□ -0.49
SREBF1-215	ENST00000487401	ZFC3H1	O60293	1989 aa	Known RBP	11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401		H3BMM5	538 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	FKBP9	O95302	570 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	C1orf105	O95561	183 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TPSB2	P20231	275 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	CXCR5	P32302	372 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	CCNF	P41002	786 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	GRIA3	P42263	894 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	GRB7	Q14451	532 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TRIP13	Q15645	432 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TPSAB1	Q15661	275 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	CYP2A13	Q16696	494 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TCTE1	Q5JU00	501 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	RNF187	Q5TA31	235 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	VWA5B1	Q5TIE3	1220 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TTLL10	Q6ZVT0	673 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TTC29	Q8NA56	475 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	GALNT11	Q8NCW6	608 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	COL26A1	Q96A83	441 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	ZUFSP	Q96AP4	578 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	MFSD3	Q96ES6	412 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	TCF12	Q99081	682 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	SELENOS	Q9BQE4	189 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	MENT	Q9BUN1	341 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	SYBU	Q9NX95	663 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401	MAP10	Q9P2G4	905 aa		11.96	□□□□□ -0.49
SREBF1-215	ENST00000487401		A0A1B0GX78	115 aa		11.95	□□□□□ -0.5

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