RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ITGA7Q13683 1181 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 RBM39Q14498 530 aaKnown RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 TCTE1Q5JU00 501 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 CEP85LQ5SZL2 805 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 CCNYL2Q5T2Q4 361 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 C1QTNF12Q5T7M4 302 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 C11orf63Q6NUN7 778 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 CORO6Q6QEF8 472 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 MOXD1Q6UVY6 613 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 C9orf139Q6ZV77 190 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 NUP54Q7Z3B4 507 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 ARHGAP22Q7Z5H3 698 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 NUDT13Q86X67 352 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 PLD3Q8IV08 490 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 RFLNBQ8N5W9 214 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 NPEPL1Q8NDH3 523 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 DMBX1Q8NFW5 382 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 OR2T12Q8NG77 320 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 IRGQQ8WZA9 623 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 MYADMQ96S97 322 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 RTP3Q9BQQ7 232 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 TFB2MQ9H5Q4 396 aaKnown RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 UPF2Q9HAU5 1272 aaKnown RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 CDH20Q9HBT6 801 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 GKN1Q9NS71 199 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF701Q9NV72 531 aaPredicted RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 POLLQ9UGP5 575 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SLC7A7Q9UM01 511 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SNX7Q9UNH6 387 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 FAF1Q9UNN5 650 aaPredicted RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 JRKLQ9Y4A0 524 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 OR6C76A6NM76 312 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 H0Y626 953 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 CCER2I3L3R5 266 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 PSMA7O14818 248 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 PRKNO60260 465 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 GBAP04062 536 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ATP1A1P05023 1023 aaKnown RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 CSN3P07498 182 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 F7P08709 466 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 HAPLN1P10915 354 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 HSPA8P11142 646 aaKnown RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 FGF5P12034 268 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ACAT1P24752 427 aaKnown RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 EPHA2P29317 976 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 TLX1P31314 330 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 CTNNA1P35221 906 aaKnown RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 PTGER4P35408 488 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 NAGLUP54802 743 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 DMP1Q13316 513 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 CA9Q16790 459 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 CCDC184Q52MB2 194 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ANO5Q75V66 913 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 SPATA19Q7Z5L4 167 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ZNF554Q86TJ5 538 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 SPEM1Q8N4L4 309 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 THAP8Q8NA92 274 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 SLC24A4Q8NFF2 622 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 OR1J1Q8NGS3 322 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 C9orf43Q8TAL5 461 aaPredicted RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ATP6V1E2Q96A05 226 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 STAMBPL1Q96FJ0 436 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 SLC47A1Q96FL8 570 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ERO1AQ96HE7 468 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ST6GAL2Q96JF0 529 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 JAKMIP1Q96N16 626 aaKnown RBP3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 KATNB1Q9BVA0 655 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 FN3KQ9H479 309 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 PELI2Q9HAT8 420 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 SPHK1Q9NYA1 384 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 COQ3Q9NZJ6 369 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 TAAR2Q9P1P5 351 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 ZDHHC2Q9UIJ5 367 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 RASAL2Q9UJF2 1139 aa3.27□□□□□ -1.89
SNRNP27-204ENST00000487029 A0A1W2PN81 502 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 ENO4A6NNW6 628 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 PLOD2O00469 737 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 KRT36O76013 467 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 NR3C1P04150 777 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 SERPINB2P05120 415 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 PLA2G4BP0C869 781 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 EPCAMP16422 314 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 ADRA2CP18825 462 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 GNAZP19086 355 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 NR1D1P20393 614 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 CASTP20810 708 aaKnown RBP3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 CHRNA7P36544 502 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 MNDAP41218 407 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 PRKCIP41743 596 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 UBASH3AP57075 661 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 DLK1P80370 383 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 TUBB2AQ13885 445 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 NPTX1Q15818 432 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 UGCGQ16739 394 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 MCMDC2Q4G0Z9 681 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 MPP7Q5T2T1 576 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 SFMBT2Q5VUG0 894 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 FAM91A1Q658Y4 838 aa3.26□□□□□ -1.89
SNRNP27-204ENST00000487029 ENPP7Q6UWV6 458 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms