RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 CA5AP35218 305 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 CBSP35520 551 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 HSD17B2P37059 387 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 RAB28P51157 221 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 ADARP55265 1226 aaKnown RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 IL2P60568 153 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 HSD11B2P80365 405 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 TUBB3Q13509 450 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 CUL1Q13616 776 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 NR1D2Q14995 579 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 RTP5Q14D33 572 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 SF1Q15637 639 aaKnown RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 KLHL38Q2WGJ6 581 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 CAPRIN2Q6IMN6 1127 aaKnown RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 UNC5AQ6ZN44 842 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 BTLAQ7Z6A9 289 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 C17orf82Q86X59 251 aaPredicted RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 KMT5CQ86Y97 462 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 C2orf73Q8N5S3 287 aaPredicted RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 TBC1D19Q8N5T2 526 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 PPM1NQ8N819 430 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 LPGAT1Q92604 370 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 KCNJ9Q92806 393 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 CLIP3Q96DZ5 547 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 PWWP2AQ96N64 755 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 FCRL3Q96P31 734 aaPredicted RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 NDNQ99608 321 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 GPR21Q99679 349 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 MAP3K3Q99759 626 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 EGFL8Q99944 293 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 RHOXF2Q9BQY4 288 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 CCDC77Q9BR77 488 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 TRIM56Q9BRZ2 755 aaKnown RBP7.8□□□□□ -1.16
USP40-216ENST00000485943 EFHD1Q9BUP0 239 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 ULBP3Q9BZM4 244 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 OR52A5Q9H2C5 316 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 XKR8Q9H6D3 395 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 SYTL2Q9HCH5 934 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 ACTR10Q9NZ32 417 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 OR6C2Q9NZP2 312 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 EPHA6Q9UF33 1036 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 PLAGL1Q9UM63 463 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 RAXQ9Y2V3 346 aa7.8□□□□□ -1.16
USP40-216ENST00000485943 KIF26BQ2KJY2 2108 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 PRAMEF33A0A0G2JMD5 474 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 ZCWPW2A0A1B0GU75 182 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 FAM95CA0A1B0GW59 222 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 SLC5A10A0PJK1 596 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 HAUS5O94927 633 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 KLK3P07288 261 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 C8GP07360 202 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 INHBAP08476 426 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CHRM5P08912 532 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 LIPCP11150 499 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 PSMA3P25788 255 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 ATP5DP30049 168 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CSF2RBP32927 897 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 SPRP35270 261 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 GRK3P35626 688 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 MAGEA3P43357 314 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 MAGEA4P43358 317 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 BDKRB1P46663 353 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 LEPRP48357 1165 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 ZFP36L1Q07352 338 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 USP10Q14694 798 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 KIR2DS3Q14952 304 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 C16orf72Q14CZ0 275 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 LGSNQ5TDP6 509 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 ANKS6Q68DC2 871 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 DUPD1Q68J44 220 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 KLC3Q6P597 504 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 TBC1D1Q86TI0 1168 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 SLC26A11Q86WA9 606 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 PROSER1Q86XN7 944 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 SLITRK4Q8IW52 837 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CPNE9Q8IYJ1 553 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CARFQ8N187 725 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 MMGT1Q8N4V1 131 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 NKAPQ8N5F7 415 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 C2CD4AQ8NCU7 369 aaPredicted RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 FBXO25Q8TCJ0 367 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 DENND1AQ8TEH3 1009 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 HNRNPLLQ8WVV9 542 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 GATA6Q92908 595 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 LINGO1Q96FE5 620 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 MED8Q96G25 268 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 SLC46A1Q96NT5 459 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CPNE1Q99829 537 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 CTRCQ99895 268 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 AARSD1Q9BTE6 412 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 DPH1Q9BZG8 443 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 P2RY12Q9H244 342 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 TFB2MQ9H5Q4 396 aaKnown RBP7.79□□□□□ -1.16
USP40-216ENST00000485943 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
USP40-216ENST00000485943 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms