RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MFSD3Q96ES6 412 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 MFRPQ9BY79 579 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 BFARQ9NZS9 450 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 LUZP4Q9P127 313 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 GPN3Q9UHW5 284 aaPredicted RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 TSR3Q9UJK0 312 aaKnown RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 TTC7AQ9ULT0 858 aaPredicted RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 PLCL2Q9UPR0 1127 aa17.86■□□□□ 0.45
CLK1-211ENST00000481641 PTRH2Q9Y3E5 179 aaKnown RBP17.86■□□□□ 0.45
CLK1-211ENST00000481641 NDUFS3O75489 264 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 CD9P21926 228 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 ARNTP27540 789 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 BDKRB1P46663 353 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 CD97P48960 835 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 NPY2RP49146 381 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 EIF3BP55884 814 aaKnown RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 DCDP81605 110 aaKnown RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 TMED2Q15363 201 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 PAPD7Q5XG87 772 aaKnown RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 FCRL6Q6DN72 434 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 UNC5DQ6UXZ4 953 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 RAB43Q86YS6 212 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 MCATQ8IVS2 390 aaKnown RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 OTUD6BQ8N6M0 293 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 IL22Q9GZX6 179 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 TXLNGQ9NUQ3 528 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 EURLQ9NYK6 297 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 IFT80Q9P2H3 777 aaPredicted RBP17.85■□□□□ 0.45
CLK1-211ENST00000481641 ANKMY1Q9P2S6 941 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 PADI2Q9Y2J8 665 aa17.85■□□□□ 0.45
CLK1-211ENST00000481641 ANKRD12Q6UB98 2062 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 RASGRF2O14827 1237 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 VAPBO95292 243 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 CCDC175P0C221 793 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 ALAS2P22557 587 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 UQCRFS1P47985 274 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 VPS41P49754 854 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 NKAIN1Q4KMZ8 207 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 CTSL3PQ5NE16 218 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 TLDC1Q6P9B6 456 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 MED25Q71SY5 747 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 MRGPREQ86SM8 312 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 TMEM102Q8N9M5 508 aaPredicted RBP17.84■□□□□ 0.45
CLK1-211ENST00000481641 OR2L8Q8NGY9 312 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 CPT1CQ8TCG5 803 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 PROKR1Q8TCW9 393 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 SKA2Q8WVK7 121 aaPredicted RBP17.84■□□□□ 0.45
CLK1-211ENST00000481641 FAM136AQ96C01 138 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 DHRS4Q9BTZ2 278 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 SLC22A11Q9NSA0 550 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 NDOR1Q9UHB4 597 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 GNPTGQ9UJJ9 305 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 SLC39A10Q9ULF5 831 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 ZNF451Q9Y4E5 1061 aa17.84■□□□□ 0.45
CLK1-211ENST00000481641 RP1L1Q8IWN7 2480 aaPredicted RBP17.84■□□□□ 0.45
CLK1-211ENST00000481641 MAST4O15021 2626 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 CLEC18AA5D8T8 446 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 AVILO75366 819 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 RPN2P04844 631 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 ITGAXP20702 1163 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 RPS3P23396 243 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLK1-211ENST00000481641 MCM3P25205 808 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 PSMB5P28074 263 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 FMO4P31512 558 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 FOLR3P41439 243 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 SSPNQ14714 243 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 SF1Q15637 639 aaKnown RBP17.83■□□□□ 0.44
CLK1-211ENST00000481641 PRR30Q53SZ7 412 aaPredicted RBP17.83■□□□□ 0.44
CLK1-211ENST00000481641 LRRC8BQ6P9F7 803 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 FIGLAQ6QHK4 219 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 CLEC18BQ6UXF7 455 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 C4orf22Q6V702 233 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 ZNF662Q6ZS27 426 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 ATCAYQ86WG3 371 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 SPNS2Q8IVW8 549 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 PRELID2Q8N945 189 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 CLEC18CQ8NCF0 446 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 MAIP1Q8WWC4 291 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 PANX3Q96QZ0 392 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 TRIM56Q9BRZ2 755 aaKnown RBP17.83■□□□□ 0.44
CLK1-211ENST00000481641 NDC1Q9BTX1 674 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 KIFC1Q9BW19 673 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 SRPK3Q9UPE1 567 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 ZKSCAN5Q9Y2L8 839 aa17.83■□□□□ 0.44
CLK1-211ENST00000481641 NAV2Q8IVL1 2488 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 SHANK1Q9Y566 2161 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 USP9XQ93008 2570 aaPredicted RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 PRICKLE3O43900 615 aaPredicted RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 NIPSNAP2O75323 286 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 SORBS2O94875 1100 aaKnown RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 C1orf105O95561 183 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 S1PR4O95977 384 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 F7P08709 466 aaPredicted RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 GNLYP22749 145 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 GCGRP47871 477 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 RRADP55042 308 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 MRPL14Q6P1L8 145 aaKnown RBP17.82■□□□□ 0.44
CLK1-211ENST00000481641 CNSTQ6PJW8 725 aa17.82■□□□□ 0.44
CLK1-211ENST00000481641 TTLL10Q6ZVT0 673 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms