RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SSPNQ14714 243 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 GRM7Q14831 915 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ARHGAP19Q14CB8 494 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 CYP1B1Q16678 543 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ZNF789Q5FWF6 425 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ASB18Q6ZVZ8 466 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 NEK10Q6ZWH5 1172 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 TTC29Q8NA56 475 aaPredicted RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 CLEC1AQ8NC01 280 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 MAGOHBQ96A72 148 aaKnown RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 FKBP10Q96AY3 582 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ZNF778Q96MU6 729 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 NAT9Q9BTE0 207 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 SLC25A23Q9BV35 468 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ING2Q9H160 280 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 XKR8Q9H6D3 395 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 WDR54Q9H977 334 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ANKMY1Q9P2S6 941 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 CDYLQ9Y232 598 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 KLK4Q9Y5K2 254 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 A0A1B0GX78 115 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCM2-213ENST00000480658 DPM1O60762 260 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 VPS26AO75436 327 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 USP1O94782 785 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 TTC4O95801 387 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 KRT14P02533 472 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 ALBP02768 609 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CATP04040 527 aaKnown RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 ZSCAN5DPP0CG00 497 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CBSLP0DN79 551 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CHRM3P20309 590 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 MGAT1P26572 445 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CXCR5P32302 372 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CBSP35520 551 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 FOLR3P41439 243 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 ILF2Q12905 390 aaKnown RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 KCNJ11Q14654 390 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 SF1Q15637 639 aaKnown RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 PAPD7Q5XG87 772 aaKnown RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 UGT3A1Q6NUS8 523 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 FAM199XQ6PEV8 388 aaPredicted RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 CCDC137Q6PK04 289 aaKnown RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 CILP2Q8IUL8 1156 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 PRELID2Q8N945 189 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 GLIS1Q8NBF1 620 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 LPGAT1Q92604 370 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 KCNJ9Q92806 393 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 MFSD3Q96ES6 412 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 FAM167BQ9BTA0 163 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 SYBUQ9NX95 663 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 IFT80Q9P2H3 777 aaPredicted RBP11.03□□□□□ -0.64
CCM2-213ENST00000480658 TP53TG5Q9Y2B4 290 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
CCM2-213ENST00000480658 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 TXNDC9O14530 226 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PCDH17O14917 1159 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 C1orf105O95561 183 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PKMP14618 531 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 MAGP20916 626 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 NMBRP28336 390 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 EMP3P54852 163 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 CSE1LP55060 971 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 PTK6Q13882 451 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 DHX34Q14147 1143 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 SEMA3AQ14563 771 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PPP1R7Q15435 360 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 ANKRD20A4Q4UJ75 823 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 ATP1A1-AS1Q5TC04 95 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 NEPROQ6NW34 567 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 FAM198BQ6UWH4 519 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 DNAJC22Q8N4W6 341 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 ZBTB2Q8N680 514 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 LMNTD1Q8N9Z9 388 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 SLC38A9Q8NBW4 561 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 OR2Y1Q8NGV0 311 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 CFAP61Q8NHU2 1237 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 ADAMTS17Q8TE56 1095 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PTERQ96BW5 349 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 GBP5Q96PP8 586 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 EBNA1BP2Q99848 306 aaKnown RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 EPN3Q9H201 632 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 ZNF71Q9NQZ8 489 aaPredicted RBP11.02□□□□□ -0.65
CCM2-213ENST00000480658 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 C5AR2Q9P296 337 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 TLK1Q9UKI8 766 aa11.02□□□□□ -0.65
CCM2-213ENST00000480658 PABPN1LA6NDY0 278 aaKnown RBP11.01□□□□□ -0.65
CCM2-213ENST00000480658 CEACAM4O75871 244 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 MATN4O95460 622 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 ERVK-10P10266 1014 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 PVRP15151 417 aa11.01□□□□□ -0.65
CCM2-213ENST00000480658 CMPK1P30085 196 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms