RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CPED1A4D0V7 1026 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 AGRPO00253 132 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 TAPBPO15533 448 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 SIGLEC6O43699 453 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 CCNT2O60583 730 aaKnown RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 SUPT7LO94864 414 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 RPN2P04844 631 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 BPGMP07738 259 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 ANXA5P08758 320 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 GIMD1P0DJR0 217 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 HOXB1P14653 301 aaPredicted RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 TYRP1P17643 537 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 EEF1DP29692 281 aaKnown RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 RXRGP48443 463 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 YBX1P67809 324 aaKnown RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 SF3A3Q12874 501 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERC4-210ENST00000480158 NAE1Q13564 534 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 GRB7Q14451 532 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 CHI3L2Q15782 390 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 OCLNQ16625 522 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 THEMIS2Q5TEJ8 643 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 BLOC1S3Q6QNY0 202 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 UNC5DQ6UXZ4 953 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 ZYG11AQ6WRX3 759 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 DCUN1D3Q8IWE4 304 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 FAM20CQ8IXL6 584 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 SLC35F3Q8IY50 421 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 TBC1D21Q8IYX1 336 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 Q8N9G6 341 aaPredicted RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 AGR3Q8TD06 166 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 ZNF480Q8WV37 535 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 LCN9Q8WX39 176 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 RAD51AP1Q96B01 352 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 SH3KBP1Q96B97 665 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 NSUN5Q96P11 429 aaKnown RBP6.24□□□□□ -1.41
HERC4-210ENST00000480158 TBC1D10AQ9BXI6 508 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 PARD6AQ9NPB6 346 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 PCOLCE2Q9UKZ9 415 aa6.24□□□□□ -1.41
HERC4-210ENST00000480158 CFAP54Q96N23 3096 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 LRP4O75096 1905 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 PPP6CO00743 305 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 NOBOXO60393 691 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 PRMT3O60678 531 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 WDR47O94967 919 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 ZNF806P0C7X5 589 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 ATP5F1P24539 256 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 PSMB5P28074 263 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 IMPA1P29218 277 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SP140Q13342 867 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 NKAIN2Q5VXU1 208 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 CES4AQ5XG92 561 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 BRICD5Q6PL45 260 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 AGTRAPQ6RW13 159 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 WASH2PQ6VEQ5 465 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 ZNF438Q7Z4V0 828 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SLC9B2Q86UD5 537 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 LCA5Q86VQ0 697 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 CNPY4Q8N129 248 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 OR9A1PQ8NGU1 263 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 MAGEC3Q8TD91 643 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 PPP4R1Q8TF05 950 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 RHBDF1Q96CC6 855 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 APOLD1Q96LR9 279 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 CCDC138Q96M89 665 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 TMEM237Q96Q45 408 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SLC38A3Q99624 504 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 EDEM2Q9BV94 578 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SRMSQ9H3Y6 488 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SEMA4BQ9NPR2 832 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 WASH6PQ9NQA3 447 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 OXSMQ9NWU1 459 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 STOX2Q9P2F5 926 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 LRIT1Q9P2V4 623 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 LNPEPQ9UIQ6 1025 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 SLC22A14Q9Y267 594 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 HCN4Q9Y3Q4 1203 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 FANCMQ8IYD8 2048 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 EP300Q09472 2414 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 KIR2DS5A0A0G2JLQ3 304 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 A0A0G2JNG1 304 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 OR6C74A6NCV1 312 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 C4orf47A7E2U8 309 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 RHPN2P1A8MT19 583 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 KIR2DS3K7RE56 304 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 CDX4O14627 284 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 SLC16A5O15375 505 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 LYPLA1O75608 230 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 ENO2P09104 434 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 XRCC1P18887 633 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 POLR2CP19387 275 aaPredicted RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 NBL1P41271 181 aa6.23□□□□□ -1.41
HERC4-210ENST00000480158 ALDH18A1P54886 795 aaKnown RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
HERC4-210ENST00000480158 KIR2DS5Q14953 304 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms