RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 IPO8O15397 1037 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 NMBRP28336 390 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 ART1P52961 327 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 SNRPEP62304 92 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 FKBP1AP62942 108 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 SNTB1Q13884 538 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 TAF7Q15545 349 aaPredicted RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 TMEM35AQ53FP2 167 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 FAM133BQ5BKY9 247 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 TCP11X2Q5H9J9 407 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 PLEKHM3Q6ZWE6 761 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 Q75L30 129 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 TICAM2Q86XR7 235 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 CEP57Q86XR8 500 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 C1orf52Q8N6N3 182 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 PRSS33Q8NF86 280 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 OR10S1Q8NGN2 331 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 SLC38A5Q8WUX1 472 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 TMEM255BQ8WV15 326 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 SLC44A1Q8WWI5 657 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 FIG4Q92562 907 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 PTERQ96BW5 349 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 MED30Q96HR3 178 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 MEIS3Q99687 375 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 NEURL2Q9BR09 285 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 THUMPD2Q9BTF0 503 aaKnown RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 CCDC106Q9BWC9 280 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 UBTD1Q9HAC8 227 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 EBF2Q9HAK2 575 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 CRNNQ9UBG3 495 aaPredicted RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 IL17BQ9UHF5 180 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 B3GALT5Q9Y2C3 310 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 COL4A4P53420 1690 aaPredicted RBP4.79□□□□□ -1.64
RFC4-212ENST00000479307 DOCK1Q14185 1865 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 DOCK2Q92608 1830 aa4.79□□□□□ -1.64
RFC4-212ENST00000479307 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 PDS5AQ29RF7 1337 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 ANKRD11Q6UB99 2663 aaPredicted RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 A0A0G2JPF8 293 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 OR5K3A6NET4 321 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 C15orf62A8K5M9 175 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 HNRNPCL3B7ZW38 293 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 CXCL11O14625 94 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 FAM106CPP0CH98 169 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 HNRNPCL4P0DMR1 293 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 MYBL1P10243 752 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 MYOD1P15172 320 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 ZNF23P17027 643 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 NANOS2P60321 138 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 ZXDBP98169 803 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 NR1D2Q14995 579 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 SF3B4Q15427 424 aaKnown RBP eCLIP4.78□□□□□ -1.643e-6■■■■■ 28.8
RFC4-212ENST00000479307 KIF19Q2TAC6 998 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 CCDC152Q4G0S7 254 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 CBWD6Q4V339 395 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 CBWD3Q5JTY5 395 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 KRT80Q6KB66 452 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 COPS6Q7L5N1 327 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 KMT5CQ86Y97 462 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 ZDHHC17Q8IUH5 632 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 ANKRD13CQ8N6S4 541 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 PAPD5Q8NDF8 572 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 LILRB1Q8NHL6 650 aaPredicted RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 SLC20A1Q8WUM9 679 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 ARSGQ96EG1 525 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 PGAP3Q96FM1 320 aaPredicted RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 MARK4Q96L34 752 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 PCYT2Q99447 389 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 MOV10L1Q9BXT6 1211 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 LRMDAQ9H2I8 198 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 MIS18AQ9NYP9 233 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 DDX25Q9UHL0 483 aaKnown RBP4.78□□□□□ -1.64
RFC4-212ENST00000479307 NCOR2Q9Y618 2525 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 BRWD1Q9NSI6 2320 aa4.78□□□□□ -1.64
RFC4-212ENST00000479307 CACNA1HO95180 2353 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 ACACBO00763 2458 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 TRBC2A0A5B9 178 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 TCP10L2B9ZVM9 353 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 ZNF587BE7ETH6 402 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 DVL1O14640 695 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 ZNHIT1O43257 154 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 CREG1O75629 220 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 ZWINTO95229 277 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 CCND3P30281 292 aaPredicted RBP4.77□□□□□ -1.65
RFC4-212ENST00000479307 COG7P83436 770 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 SLC20A2Q08357 652 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 ALCAMQ13740 583 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 MELKQ14680 651 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 SLC39A14Q15043 492 aa4.77□□□□□ -1.65
RFC4-212ENST00000479307 SNAPC1Q16533 368 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms