RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 LOC285095A0A1B0GVY8 99 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 PCCBP05166 539 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ATP1B2P14415 290 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ENGP17813 658 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ALOX12P18054 663 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CTSOP43234 321 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CDH12P55289 794 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 BNIP3Q12983 259 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 HSPB3Q12988 150 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 DAG1Q14118 895 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CARTPTQ16568 116 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 UAP1L1Q3KQV9 507 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CCNYL2Q5T2Q4 361 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 OGFRL1Q5TC84 451 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 FAM91A1Q658Y4 838 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 TNFAIP8L2Q6P589 184 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 PGM2L1Q6PCE3 622 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM207Q6UWW9 146 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CASP12Q6UXS9 341 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ADGRG6Q86SQ4 1221 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 C17orf64Q86WR6 236 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 HIPK1Q86Z02 1210 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 PHYKPLQ8IUZ5 450 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 KRT78Q8N1N4 520 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF513Q8N8E2 541 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF382Q96SR6 550 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 RBM4BQ9BQ04 359 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 RBM4Q9BWF3 364 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 REXO4Q9GZR2 422 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 AIG1Q9NVV5 245 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 IL17CQ9P0M4 197 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D14Q9P2M4 693 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 VPS29Q9UBQ0 182 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 A0A1W2PPW3 197 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 A6NHS1 94 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 ELK4P28324 431 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 EMX2Q04743 252 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MED22Q15528 200 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MEP1AQ16819 746 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PSRC1Q6PGN9 363 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 LARP4Q71RC2 724 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 C12orf76Q8N812 135 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CHST14Q8NCH0 376 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CSGALNACT1Q8TDX6 532 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TMIGD2Q96BF3 282 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PPP1R16AQ96I34 528 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 FERD3LQ96RJ6 166 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 NODALQ96S42 347 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 DUSP26Q9BV47 211 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 LINC00597Q9H2U6 94 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PDE10AQ9Y233 779 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MAGED1Q9Y5V3 778 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SLC31A1O15431 190 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 LEFTY1O75610 366 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 GNAO1P09471 354 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SSR2P43308 183 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MRPS15P82914 257 aaKnown RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 DSC1Q08554 894 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 DSC3Q14574 896 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SF1Q15637 639 aaKnown RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 GALNT18Q6P9A2 607 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 HEATR4Q86WZ0 1026 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CNTN4Q8IWV2 1026 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 LILRA2Q8N149 483 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PSMA8Q8TAA3 256 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 UBXN10Q96LJ8 280 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CLSTN3Q9BQT9 956 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SMOXQ9NWM0 555 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 HCFC1R1Q9NWW0 138 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PTTG2Q9NZH5 202 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3DA0A087WVF3 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3IA0A087WXS9 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3EA0A087X179 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3KA0A087X1G2 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3FA6NER0 549 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3LB9A6J9 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 FBP2O00757 339 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TULP3O75386 442 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SCELO95171 688 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 C8GP07360 202 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3HP0C7X1 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PRPS2P11908 318 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 FUT4P22083 530 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CTSKP43235 329 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TUBB3Q13509 450 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SYT16Q17RD7 645 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3GQ6DHY5 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3CQ6IPX1 549 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CES5AQ6NT32 575 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MED27Q6P2C8 311 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TRIM40Q6P9F5 258 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CYP4Z1Q86W10 505 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 TBC1D3Q8IZP1 549 aaPredicted RBP10.76□□□□□ -0.69
COL27A1-204ENST00000477421 SVOPQ8N4V2 548 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 LMNTD1Q8N9Z9 388 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 ZFP28Q8NHY6 868 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms