RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 GNPTGQ9UJJ9 305 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 SNX12Q9UMY4 172 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 RUVBL2Q9Y230 463 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 PCDHGA9Q9Y5G4 932 aaKnown RBP18.16■□□□□ 0.5
COMMD1-207ENST00000471704 NFS1Q9Y697 457 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 CCDC88CQ9P219 2028 aa18.16■□□□□ 0.5
COMMD1-207ENST00000471704 A0A0J9YY10 115 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 GOLGA8MH3BSY2 632 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 NIPSNAP2O75323 286 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 NDUFS3O75489 264 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 APOA4P06727 396 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 MAGEA3P43357 314 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 GBX1Q14549 363 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 CCSMST1Q4G0I0 132 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 FAM198BQ6UWH4 519 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 UNC5DQ6UXZ4 953 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 CENPUQ71F23 418 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 ENDOVQ8N8Q3 282 aaKnown RBP18.15■□□□□ 0.5
COMMD1-207ENST00000471704 NAT8LQ8N9F0 302 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 MCUQ8NE86 351 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 CHRNA10Q9GZZ6 450 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 ACTR5Q9H9F9 607 aaPredicted RBP18.15■□□□□ 0.5
COMMD1-207ENST00000471704 SERTAD3Q9UJW9 196 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 TCFL5Q9UL49 500 aa18.15■□□□□ 0.5
COMMD1-207ENST00000471704 ZCWPW2A0A1B0GU75 182 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 ZSCAN12O43309 604 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 CEACAM4O75871 244 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 MLNP12872 115 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 FMO4P31512 558 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 RAB28P51157 221 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 SLC5A12Q1EHB4 618 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 FAM69BQ5VUD6 431 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 ZNF385CQ66K41 422 aaPredicted RBP18.14■□□□□ 0.49
COMMD1-207ENST00000471704 LRRC6Q86X45 466 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 DCUN1D3Q8IWE4 304 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 SYTL1Q8IYJ3 562 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 C2orf73Q8N5S3 287 aaPredicted RBP18.14■□□□□ 0.49
COMMD1-207ENST00000471704 OTUD6BQ8N6M0 293 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 CLIP3Q96DZ5 547 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 PANX3Q96QZ0 392 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 ING2Q9H160 280 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 KLHL20Q9Y2M5 609 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 CRYL1Q9Y2S2 319 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 ANKRD12Q6UB98 2062 aa18.14■□□□□ 0.49
COMMD1-207ENST00000471704 SPTAN1Q13813 2472 aaKnown RBP18.14■□□□□ 0.49
COMMD1-207ENST00000471704 UTP20O75691 2785 aaKnown RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 FAM237BA0A1B0GVD1 139 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ARGFXA6NJG6 315 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ISM1B1AKI9 464 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 CES2O00748 559 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 MAP3K7O43318 606 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ZNF749O43361 778 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 OGNP20774 298 aaKnown RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 CYP2A7P20853 494 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 PTGIRP43119 386 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 BDKRB1P46663 353 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 MLLT10P55197 1068 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ITGA1P56199 1179 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 SARNPP82979 210 aaKnown RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 CHAF1BQ13112 559 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 KIR2DS3Q14952 304 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 TMED2Q15363 201 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 PTCHD3Q3KNS1 767 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ANKRD20A4Q4UJ75 823 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ARMC3Q5W041 872 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 MRNIPQ6NTE8 343 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 CILP2Q8IUL8 1156 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ZNF669Q96BR6 464 aaPredicted RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 FAM136AQ96C01 138 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 TCTN2Q96GX1 697 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 SIGLEC10Q96LC7 697 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 NAP1L3Q99457 506 aaPredicted RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 DPH2Q9BQC3 489 aaPredicted RBP18.13■□□□□ 0.49
COMMD1-207ENST00000471704 SLC25A23Q9BV35 468 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 ANKMY1Q9P2S6 941 aa18.13■□□□□ 0.49
COMMD1-207ENST00000471704 E7EQ34 232 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 RASGRF2O14827 1237 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 PRICKLE3O43900 615 aaPredicted RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 C1orf105O95561 183 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 CD9P21926 228 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 FNTAP49354 379 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 CCL11P51671 97 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 PGDP52209 483 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 ADARP55265 1226 aaKnown RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 DHX34Q14147 1143 aaKnown RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 CASC4Q6P4E1 433 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 OTOAQ7RTW8 1153 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 TAX1BP1Q86VP1 789 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 DNAJC22Q8N4W6 341 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 OR2L8Q8NGY9 312 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 DENND1AQ8TEH3 1009 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 TCF12Q99081 682 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 SLC30A3Q99726 388 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 SPRTNQ9H040 489 aaPredicted RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 XAB2Q9HCS7 855 aaKnown RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 ACSS2Q9NR19 701 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 TSR3Q9UJK0 312 aaKnown RBP18.12■□□□□ 0.49
COMMD1-207ENST00000471704 SNX7Q9UNH6 387 aa18.12■□□□□ 0.49
COMMD1-207ENST00000471704 MED16Q9Y2X0 877 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms