RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 TREX1Q9NSU2 369 aa14.24□□□□□ -0.13
SDCCAG3-209ENST00000468963 CATSPERZQ9NTU4 200 aa14.24□□□□□ -0.13
SDCCAG3-209ENST00000468963 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
SDCCAG3-209ENST00000468963 DHCR7Q9UBM7 475 aaKnown RBP14.24□□□□□ -0.13
SDCCAG3-209ENST00000468963 KLHL20Q9Y2M5 609 aa14.24□□□□□ -0.13
SDCCAG3-209ENST00000468963 KRT86O43790 486 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 PRICKLE3O43900 615 aaPredicted RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 DPM1O60762 260 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 VPS4BO75351 444 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 ONECUT2O95948 504 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 APOA4P06727 396 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 OTX2P32243 289 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 UQCRFS1P47985 274 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 NPY2RP49146 381 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 SESN2P58004 480 aaPredicted RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 NKAIN1Q4KMZ8 207 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 UNC5DQ6UXZ4 953 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 MRGPREQ86SM8 312 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 MCATQ8IVS2 390 aaKnown RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 TMEM151BQ8IW70 566 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 CCDC89Q8N998 374 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 PPHLN1Q8NEY8 458 aaKnown RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 OR2L8Q8NGY9 312 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 CFAP61Q8NHU2 1237 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 PTERQ96BW5 349 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 IP6K3Q96PC2 410 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 IL17FQ96PD4 163 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 TSSK1BQ9BXA7 367 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 EIF2B3Q9NR50 452 aaKnown RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 GPR83Q9NYM4 423 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 C5AR2Q9P296 337 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 GPN3Q9UHW5 284 aaPredicted RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 ANAPC5Q9UJX4 755 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 VPS4AQ9UN37 437 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 SRPK3Q9UPE1 567 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 PTRH2Q9Y3E5 179 aaKnown RBP14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 HIVEP3Q5T1R4 2406 aa14.23□□□□□ -0.13
SDCCAG3-209ENST00000468963 GP1BBP13224 206 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 MAGP20916 626 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 GNLYP22749 145 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 NMBRP28336 390 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 TTPAP49638 278 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 SOX8P57073 446 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 FOXL2P58012 376 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 CRADDP78560 199 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 INPP5JQ15735 1006 aaPredicted RBP14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 AARS2Q5JTZ9 985 aaKnown RBP14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 FCRL6Q6DN72 434 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 FIGLAQ6QHK4 219 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 C4orf22Q6V702 233 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 ZNF662Q6ZS27 426 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 DCUN1D3Q8IWE4 304 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 OR2Y1Q8NGV0 311 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 SLC22A18Q96BI1 424 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 MFRPQ9BY79 579 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 CIDEBQ9UHD4 219 aa14.22□□□□□ -0.13
SDCCAG3-209ENST00000468963 NOTCH2Q04721 2471 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 RASGRF2O14827 1237 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 S1PR4O95977 384 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 RPN2P04844 631 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 UMODP07911 640 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 ITGAXP20702 1163 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 RPS3P23396 243 aaKnown RBP eCLIP14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 ARNTP27540 789 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 FOLR3P41439 243 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 GRIA3P42263 894 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 PLEKHN1Q494U1 663 aaPredicted RBP14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 DCAF10Q5QP82 559 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 SLC6A19Q695T7 634 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 PPP1R32Q7Z5V6 425 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 MPP5Q8N3R9 675 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 PNPLA2Q96AD5 504 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 ZUFSPQ96AP4 578 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 FER1L6-AS2Q96M78 137 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 ZNF285Q96NJ3 590 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 NDC1Q9BTX1 674 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 KIFC1Q9BW19 673 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 IL22Q9GZX6 179 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 TXLNGQ9NUQ3 528 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 P4HTMQ9NXG6 502 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 BFARQ9NZS9 450 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 NDOR1Q9UHB4 597 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 G3BP2Q9UN86 482 aaKnown RBP14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 ZKSCAN5Q9Y2L8 839 aa14.21□□□□□ -0.13
SDCCAG3-209ENST00000468963 TEX15Q9BXT5 2789 aa14.21□□□□□ -0.14
SDCCAG3-209ENST00000468963 MDC1Q14676 2089 aaKnown RBP14.21□□□□□ -0.14
SDCCAG3-209ENST00000468963 BLACEA4D250 179 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 TARM1B6A8C7 271 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 PEX12O00623 359 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 KPNA5O15131 536 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 NDUFS3O75489 264 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 C1orf105O95561 183 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 IGHEP01854 428 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 ALAS2P22557 587 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 KCNJ1P48048 391 aa14.2□□□□□ -0.14
SDCCAG3-209ENST00000468963 ARSFP54793 590 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms