RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 Q9N2K0 584 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 A0A087WV48 116 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 TRAV34A0A0B4J273 112 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 OR6C76A6NM76 312 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 RPN1P04843 607 aaKnown RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 FGF5P12034 268 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 PDGFRAP16234 1089 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 CYP11B2P19099 503 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 CD22P20273 847 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 AZGP1P25311 298 aaKnown RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 PTPN3P26045 913 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 EPHA2P29317 976 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 PDX1P52945 283 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 MZT1Q08AG7 82 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 DMPKQ09013 629 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 CUL3Q13618 768 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 OTUD3Q5T2D3 398 aaPredicted RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 SFMBT2Q5VUG0 894 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 SLC35E4Q6ICL7 350 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 NUP54Q7Z3B4 507 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 DNAJB7Q7Z6W7 309 aaPredicted RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 ABI3BPQ7Z7G0 1075 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 THAP8Q8NA92 274 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 NPEPL1Q8NDH3 523 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 KLHDC9Q8NEP7 349 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 TM9SF4Q92544 642 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 FBXO17Q96EF6 278 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 FZD8Q9H461 694 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 PELI2Q9HAT8 420 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 CDH20Q9HBT6 801 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 GKN1Q9NS71 199 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 ECHDC1Q9NTX5 307 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 ZNF701Q9NV72 531 aaPredicted RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 POLLQ9UGP5 575 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 MTUS1Q9ULD2 1270 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 SNX7Q9UNH6 387 aa3.81□□□□□ -1.8
CLK1-208ENST00000464454 TCF20Q9UGU0 1960 aaKnown RBP3.81□□□□□ -1.8
CLK1-208ENST00000464454 GREB1LQ9C091 1923 aaPredicted RBP3.8□□□□□ -1.8
CLK1-208ENST00000464454 FLT1P17948 1338 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 PCDH11YQ9BZA8 1340 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 HTR3EA5X5Y0 456 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 PRR23AA6NEV1 266 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 PSMA7O14818 248 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 CLIC2O15247 247 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 AP5Z1O43299 807 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 ACSL3O95573 720 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 NR3C1P04150 777 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 CSN3P07498 182 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 HSPA8P11142 646 aaKnown RBP3.8□□□□□ -1.8
CLK1-208ENST00000464454 NR1D1P20393 614 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 TIMP3P35625 211 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 MNDAP41218 407 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 CDH11P55287 796 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 SCN1BQ07699 218 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 CCDC6Q16204 474 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 MCMDC2Q4G0Z9 681 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 TCTE1Q5JU00 501 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 GSG1LQ6UXU4 331 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 SPATA21Q7Z572 469 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 SPATA19Q7Z5L4 167 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 OR1J1Q8NGS3 322 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 HSD17B8Q92506 261 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 ATP6V1E2Q96A05 226 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 THOC1Q96FV9 657 aaKnown RBP3.8□□□□□ -1.8
CLK1-208ENST00000464454 PGLYRP2Q96PD5 576 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 KATNB1Q9BVA0 655 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 MIS12Q9H081 205 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 FN3KQ9H479 309 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 CHCHD3Q9NX63 227 aaKnown RBP3.8□□□□□ -1.8
CLK1-208ENST00000464454 SPHK1Q9NYA1 384 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 COQ3Q9NZJ6 369 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 POMT1Q9Y6A1 747 aa3.8□□□□□ -1.8
CLK1-208ENST00000464454 SMCHD1A6NHR9 2005 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 PCDH7O60245 1069 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 PRKRAO75569 313 aaKnown RBP3.79□□□□□ -1.8
CLK1-208ENST00000464454 SIX3O95343 332 aaPredicted RBP3.79□□□□□ -1.8
CLK1-208ENST00000464454 MOCS3O95396 460 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 PIGNO95427 931 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 GBAP04062 536 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 PLA2G4BP0C869 781 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 GNAZP19086 355 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 ACAT1P24752 427 aaKnown RBP3.79□□□□□ -1.8
CLK1-208ENST00000464454 PTGER4P35408 488 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 HSD17B3P37058 310 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 DCTP40126 519 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 NAGLUP54802 743 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
CLK1-208ENST00000464454 KRT83P78385 493 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 LGALS3BPQ08380 585 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 ITGA7Q13683 1181 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 VEZF1Q14119 521 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 UGCGQ16739 394 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 CA9Q16790 459 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 CYP4A22Q5TCH4 519 aa3.79□□□□□ -1.8
CLK1-208ENST00000464454 C11orf88Q6PI97 169 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms