RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SRSF6Q13247 344 aaKnown RBP16.48■□□□□ 0.23
VPS52-215ENST00000464425 GRB7Q14451 532 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 NAA30Q147X3 362 aaPredicted RBP16.48■□□□□ 0.23
VPS52-215ENST00000464425 KLHL38Q2WGJ6 581 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 TTLL9Q3SXZ7 439 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 CCSMST1Q4G0I0 132 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 RBM20Q5T481 1227 aaKnown RBP16.48■□□□□ 0.23
VPS52-215ENST00000464425 BROXQ5VW32 411 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 STRA8Q7Z7C7 330 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 TRIM73Q86UV7 250 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 TAX1BP1Q86VP1 789 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 KMT5CQ86Y97 462 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 INPP5DQ92835 1189 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 TEFMQ96QE5 360 aaKnown RBP16.48■□□□□ 0.23
VPS52-215ENST00000464425 CPNE1Q99829 537 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 ZPBPQ9BS86 351 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 C1GALT1Q9NS00 363 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 SLC39A10Q9ULF5 831 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 DHRS7Q9Y394 339 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 PSAT1Q9Y617 370 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 ISM1B1AKI9 464 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 VPS26AO75436 327 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 MATN4O95460 622 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 ST6GAL1P15907 406 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 UGT2B7P16662 529 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 ZNF28P17035 718 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 ATP5DP30049 168 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 PKLRP30613 574 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 RAB28P51157 221 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 TUBB3Q13509 450 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 IL11RAQ14626 422 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
VPS52-215ENST00000464425 SPESP1Q6UW49 350 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 VASH2Q86V25 355 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 ZC3HC1Q86WB0 502 aaKnown RBP16.47■□□□□ 0.23
VPS52-215ENST00000464425 DTX1Q86Y01 620 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 RASGRP3Q8IV61 690 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 D2HGDHQ8N465 521 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 LINC01555Q8NAE3 123 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 CAVIN3Q969G5 261 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 RAD51AP1Q96B01 352 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 OR2A14Q96R47 310 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 MENTQ9BUN1 341 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 CPNE5Q9HCH3 593 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 PDE7BQ9NP56 450 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 TXNDC16Q9P2K2 825 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 KLHL42Q9P2K6 505 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 LHX6Q9UPM6 363 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 CFAP47Q6ZTR5 3102 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 SDK2Q58EX2 2172 aa16.47■□□□□ 0.23
VPS52-215ENST00000464425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.46■□□□□ 0.23
VPS52-215ENST00000464425 CTIFO43310 598 aaKnown RBP16.46■□□□□ 0.23
VPS52-215ENST00000464425 PIAS1O75925 651 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 STK17BO94768 372 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 PEBP1P30086 187 aaKnown RBP16.46■□□□□ 0.23
VPS52-215ENST00000464425 GP5P40197 560 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CCNFP41002 786 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 SKIV2L2P42285 1042 aaKnown RBP16.46■□□□□ 0.23
VPS52-215ENST00000464425 CDKN2DP55273 166 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CXADRP78310 365 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 TIAL1Q01085 375 aaKnown RBP eCLIP16.46■□□□□ 0.23
VPS52-215ENST00000464425 ACY1Q03154 408 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 SLC29A2Q14542 456 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 GPR19Q15760 415 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 TMTC4Q5T4D3 741 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 GRTP1Q5TC63 336 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 PPP1R3BQ86XI6 285 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CTAGE3PQ8IX95 158 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 FAM20CQ8IXL6 584 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CPNE9Q8IYJ1 553 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CARFQ8N187 725 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 PPM1NQ8N819 430 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 FLVCR1-AS1Q8TAF5 88 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 CD200R1Q8TD46 325 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 NKD1Q969G9 470 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 TRAPPC9Q96Q05 1148 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 PITPNM3Q9BZ71 974 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 ULBP3Q9BZM4 244 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 SPRY4Q9C004 299 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 EPB41L4BQ9H329 900 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 RHOJQ9H4E5 214 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 FGF21Q9NSA1 209 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 TRMT6Q9UJA5 497 aaKnown RBP16.46■□□□□ 0.23
VPS52-215ENST00000464425 PILRAQ9UKJ1 303 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 RARRES3Q9UL19 164 aa16.46■□□□□ 0.23
VPS52-215ENST00000464425 ADAMTS20P59510 1910 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 PTPRQQ9UMZ3 2332 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 TEX51A0A1B0GUA7 166 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 ARHGEF33A8MVX0 844 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 RASGRF2O14827 1237 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 MAP3K7O43318 606 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 RAD1O60671 282 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 FGF5P12034 268 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 PGGT1BP53609 377 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.45■□□□□ 0.22
VPS52-215ENST00000464425 MANEAQ5SRI9 462 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 UGT3A1Q6NUS8 523 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 CYHR1Q6ZMK1 362 aa16.45■□□□□ 0.22
VPS52-215ENST00000464425 TIPARPQ7Z3E1 657 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms