RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 S1PR4O95977 384 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 RPS3P23396 243 aaKnown RBP eCLIP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 OTX2P32243 289 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TERF1P54274 439 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 EIF3BP55884 814 aaKnown RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 CDK16Q00536 496 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 ATP1A4Q13733 1029 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 SSPNQ14714 243 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TRIP13Q15645 432 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TTC23LQ6PF05 361 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 SDCCAG8Q86SQ7 713 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TAX1BP1Q86VP1 789 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 LRRC6Q86X45 466 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 RAB43Q86YS6 212 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 MCATQ8IVS2 390 aaKnown RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 OTUD6BQ8N6M0 293 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 PRELID2Q8N945 189 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 FDCSPQ8NFU4 85 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 OR2L8Q8NGY9 312 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 GSDMBQ8TAX9 411 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 PROKR1Q8TCW9 393 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 NDC1Q9BTX1 674 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 MRM3Q9HC36 420 aaKnown RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TXLNGQ9NUQ3 528 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 SYBUQ9NX95 663 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 IFT80Q9P2H3 777 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 TTC7AQ9ULT0 858 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-205ENST00000463818 SRPK3Q9UPE1 567 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 HECTD1Q9ULT8 2610 aa18.14■□□□□ 0.49
SF3A1-205ENST00000463818 RASGRF2O14827 1237 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 KPNA5O15131 536 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 CD63P08962 238 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 TPSB2P20231 275 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 ALAS2P22557 587 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 ARNTP27540 789 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 FMO4P31512 558 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 GRIA3P42263 894 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 CD97P48960 835 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 RRADP55042 308 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 SF1Q15637 639 aaKnown RBP18.13■□□□□ 0.49
SF3A1-205ENST00000463818 TPSAB1Q15661 275 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 NADK2Q4G0N4 442 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 FIGLAQ6QHK4 219 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 OTOAQ7RTW8 1153 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 SKA2Q8WVK7 121 aaPredicted RBP18.13■□□□□ 0.49
SF3A1-205ENST00000463818 RAD51AP1Q96B01 352 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 PTRH2Q9Y3E5 179 aaKnown RBP18.13■□□□□ 0.49
SF3A1-205ENST00000463818 ZNF451Q9Y4E5 1061 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 PCDHGB7Q9Y5F8 929 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 NFS1Q9Y697 457 aa18.13■□□□□ 0.49
SF3A1-205ENST00000463818 CYSRT1A8MQ03 144 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 GOLGA8KD6RF30 607 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 GOLGA8TH3BQL2 631 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 C1orf105O95561 183 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 FOLR3P41439 243 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 CCZ1BP86790 482 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 CCZ1P86791 482 aaPredicted RBP18.12■□□□□ 0.49
SF3A1-205ENST00000463818 SLC9A5Q14940 896 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 NKAIN1Q4KMZ8 207 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 CTSL3PQ5NE16 218 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 FCRL6Q6DN72 434 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 MRNIPQ6NTE8 343 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 ATCAYQ86WG3 371 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 BIRC8Q96P09 236 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 IP6K3Q96PC2 410 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 NUDT9Q9BW91 350 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 INTS7Q9NVH2 962 aaKnown RBP18.12■□□□□ 0.49
SF3A1-205ENST00000463818 NDOR1Q9UHB4 597 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 SOX13Q9UN79 622 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 G3BP2Q9UN86 482 aaKnown RBP18.12■□□□□ 0.49
SF3A1-205ENST00000463818 MED13Q9UHV7 2174 aa18.12■□□□□ 0.49
SF3A1-205ENST00000463818 PRICKLE3O43900 615 aaPredicted RBP18.11■□□□□ 0.49
SF3A1-205ENST00000463818 CNOT3O75175 753 aaKnown RBP18.11■□□□□ 0.49
SF3A1-205ENST00000463818 AVILO75366 819 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 BDKRB1P46663 353 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 VPS41P49754 854 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 SARNPP82979 210 aaKnown RBP18.11■□□□□ 0.49
SF3A1-205ENST00000463818 GPS1Q13098 491 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 CCSMST1Q4G0I0 132 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 MRPL14Q6P1L8 145 aaKnown RBP18.11■□□□□ 0.49
SF3A1-205ENST00000463818 MRGPREQ86SM8 312 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 OR2Y1Q8NGV0 311 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 PTERQ96BW5 349 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 FOPNLQ96NB1 174 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 TCF12Q99081 682 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 SLC22A11Q9NSA0 550 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 RUVBL2Q9Y230 463 aaKnown RBP18.11■□□□□ 0.49
SF3A1-205ENST00000463818 PPP2R2CQ9Y2T4 447 aa18.11■□□□□ 0.49
SF3A1-205ENST00000463818 PFDN6O15212 129 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 GCGRP47871 477 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 ARSFP54793 590 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 FOXL2P58012 376 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 RAPSNQ13702 412 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 KCNJ11Q14654 390 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 ZC3H12BQ5HYM0 836 aaKnown RBP18.1■□□□□ 0.49
SF3A1-205ENST00000463818 TTLL10Q6ZVT0 673 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 TMEM151BQ8IW70 566 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 EFCAB3Q8N7B9 438 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 CPT1CQ8TCG5 803 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms