RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CCDC138Q96M89 665 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 DERL2Q9GZP9 239 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 SOHLH2Q9NX45 425 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 CTNNAL1Q9UBT7 734 aa19.16■□□□□ 0.66
COL9A3-204ENST00000463487 A0A087X1B8 175 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 PHGDHO43175 533 aaKnown RBP19.15■□□□□ 0.66
COL9A3-204ENST00000463487 CCDC166P0CW27 439 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 TYK2P29597 1187 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SLC26A3P40879 764 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SEPHS1P49903 392 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 PNLIPRP1P54315 467 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 RAB15P59190 212 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 ATP6V0D1P61421 351 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 CYP2A13Q16696 494 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SLC5A12Q1EHB4 618 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 UBAP2Q5T6F2 1119 aaKnown RBP19.15■□□□□ 0.66
COL9A3-204ENST00000463487 IGF2-ASQ6U949 168 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 FRA10AC1Q70Z53 315 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 RASGRP3Q8IV61 690 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SYTL1Q8IYJ3 562 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 ATL1Q8WXF7 558 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 KLHL6Q8WZ60 621 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SMPDL3AQ92484 453 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 MTBPQ96DY7 904 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 IL17FQ96PD4 163 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 MAP3K3Q99759 626 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 MENTQ9BUN1 341 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 THSD1Q9NS62 852 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 INTS7Q9NVH2 962 aaKnown RBP19.15■□□□□ 0.66
COL9A3-204ENST00000463487 SEMA5BQ9P283 1151 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 PISDQ9UG56 409 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 CIDEBQ9UHD4 219 aa19.15■□□□□ 0.66
COL9A3-204ENST00000463487 NOVA2Q9UNW9 492 aaKnown RBP19.15■□□□□ 0.66
COL9A3-204ENST00000463487 A0A0J9YY10 115 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 EFCAB7A8K855 629 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 B4E171 279 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 TPBGLP0DKB5 382 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 UGT2B7P16662 529 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 TSPAN7P41732 249 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PPP1CAP62136 330 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 HSD11B2P80365 405 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 BMPR2Q13873 1038 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 CCSMST1Q4G0I0 132 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PKP4Q99569 1192 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PARD6BQ9BYG5 372 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PITPNM3Q9BZ71 974 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 FANCEQ9HB96 536 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 ARL15Q9NXU5 204 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PDE10AQ9Y233 779 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 ACOT9Q9Y305 439 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 PCDHB11Q9Y5F2 797 aa19.14■□□□□ 0.65
COL9A3-204ENST00000463487 IQANK1A0A1B0GTG1 560 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 KIF1CO43896 1103 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 DXOO77932 396 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 TNFSF15O95150 251 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 CCNDBP1O95273 360 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SLC16A8O95907 504 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SNRPAP09012 282 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 ERGP11308 486 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 NELFEP18615 380 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 CCND1P24385 295 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 OAS2P29728 719 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 RPA3P35244 121 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 TSTA3Q13630 321 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SF1Q15637 639 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 KLC3Q6P597 504 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 TMEM207Q6UWW9 146 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 LINC01555Q8NAE3 123 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 DCAKDQ8WVC6 231 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 CAVIN3Q969G5 261 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SLC41A2Q96JW4 573 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 TSNARE1Q96NA8 513 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 OR2A14Q96R47 310 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 ASPSCR1Q9BZE9 553 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 B3GNT4Q9C0J1 378 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 CCDC86Q9H6F5 360 aaKnown RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 NMRAL1Q9HBL8 299 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 PDE7BQ9NP56 450 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SNX15Q9NRS6 342 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 PSMC3IPQ9P2W1 217 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-204ENST00000463487 ADAMTS6Q9UKP5 1117 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 SPEGQ15772 3267 aa19.13■□□□□ 0.65
COL9A3-204ENST00000463487 IGHV5-51A0A0C4DH38 117 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 CCDC189A1A4V9 331 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 TMEM8BA6NDV4 472 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 NPEPPSL1A6NEC2 478 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 AGRPO00253 132 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 LTA4HP09960 611 aaKnown RBP19.12■□□□□ 0.65
COL9A3-204ENST00000463487 PGGT1BP53609 377 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 MAPK10P53779 464 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 ERVPABLB-1P60509 514 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 ACY1Q03154 408 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 CSHL1Q14406 222 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 FAM83EQ2M2I3 478 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 DCAF12Q5T6F0 453 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 THEMIS2Q5TEJ8 643 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 UNQ6494/PRO21346Q6UXR6 183 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 CMC1Q7Z7K0 106 aa19.12■□□□□ 0.65
COL9A3-204ENST00000463487 TAX1BP1Q86VP1 789 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms