RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MARCKSP29966 332 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 NMT1P30419 496 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CSTF2P33240 577 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC1A3P43003 542 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 NPBWR1P48145 328 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 LEPRP48357 1165 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 FNTAP49354 379 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CEBPDP49716 269 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CRYBB1P53674 252 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CLRN1P58418 232 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 RPL23AP62750 156 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 IRX4P78413 519 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SHC2P98077 582 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRKAA1Q13131 559 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 DRP2Q13474 957 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TUBA3CQ13748 450 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GNA13Q14344 377 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ST3GAL2Q16842 350 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MTHFSDQ2M296 383 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CERKLQ49MI3 558 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 LBHQ53QV2 105 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 AKNAD1Q5T1N1 836 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CCNYL2Q5T2Q4 361 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KRT40Q6A162 431 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GRHL2Q6ISB3 625 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ACSM6Q6P461 480 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRMT10BQ6PF06 316 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRMT10CQ7L0Y3 403 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KIAA1328Q86T90 577 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SERINC5Q86VE9 423 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM173Q86WV6 379 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 C12orf56Q8IXR9 622 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLHDC8AQ8IYD2 350 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 STPG3Q8N7X2 389 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 RNF169Q8NCN4 708 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KIAA0895Q8NCT3 520 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 NSUN7Q8NE18 718 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 C17orf47Q8NEP4 570 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 POC1BQ8TC44 478 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GDPD5Q8WTR4 605 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MITD1Q8WV92 249 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR1E3Q8WZA6 343 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRIB2Q92519 343 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC25A28Q96A46 364 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MCUR1Q96AQ8 359 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLCO4A1Q96BD0 722 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF583Q96ND8 569 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRNT1Q96Q11 434 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR1F2PQ96R84 312 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CHP1Q99653 195 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KCNS3Q9BQ31 491 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 BPIFA3Q9BQP9 254 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF559Q9BR84 538 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 OSBPL10Q9BXB5 764 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 FRMD8P1Q9BZ68 369 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KATNBL1Q9H079 304 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLC2Q9H0B6 622 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 RHBGQ9H310 441 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SMOC2Q9H3U7 446 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TDRD3Q9H7E2 651 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC28A3Q9HAS3 691 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAGEF1Q9HAY2 307 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 NEK6Q9HC98 313 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRPC7Q9HCX4 862 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CHMP1AQ9HD42 196 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 UPB1Q9UBR1 384 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 IL20RAQ9UHF4 553 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 DHDHQ9UQ10 334 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GAB2Q9UQC2 676 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MRPS33Q9Y291 106 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 REXO2Q9Y3B8 237 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 RBM8AQ9Y5S9 174 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ASTN2O75129 1339 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 PNPLA7Q6ZV29 1317 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM240BA0A1B0GVZ2 78 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 HEATR9A2RTY3 570 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM149AA5PLN7 773 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR6C68A6NDL8 312 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 MROH6A6NGR9 719 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 TCP11X1B4DZS4 312 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 TARM1B6A8C7 271 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 CES2O00748 559 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRRG2O14669 202 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAP2K7O14733 419 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 PPM1DO15297 605 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 PJA2O43164 708 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 KCNAB3O43448 404 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 SULT1B1O43704 296 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLK8O60259 260 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRAMEF11O60813 436 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 CDH16O75309 829 aa4.29□□□□□ -1.72
HMGB3P21-201ENST00000452483 CLPXO76031 633 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms