RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TCTE1Q5JU00 501 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 NEPROQ6NW34 567 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 NEK10Q6ZWH5 1172 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 MED25Q71SY5 747 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 PCGF5Q86SE9 256 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 CILP2Q8IUL8 1156 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 VRK3Q8IV63 474 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 REXO1L1PQ8IX06 675 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 TMEM102Q8N9M5 508 aaPredicted RBP15.45■□□□□ 0.06
SGCE-208ENST00000450385 LPGAT1Q92604 370 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 NAT9Q9BTE0 207 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 GRPEL1Q9HAV7 217 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 SPHK1Q9NYA1 384 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 IL1RAPL1Q9NZN1 696 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 G3BP2Q9UN86 482 aaKnown RBP15.45■□□□□ 0.06
SGCE-208ENST00000450385 SNX7Q9UNH6 387 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 NEU2Q9Y3R4 380 aa15.45■□□□□ 0.06
SGCE-208ENST00000450385 MED13Q9UHV7 2174 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 TCRBV7S3A2A0A539 114 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ZNF839A8K0R7 811 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 IQCF5A8MTL0 148 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ZSCAN9O15535 394 aaPredicted RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 SRPX2O60687 465 aaPredicted RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 USP1O94782 785 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 C1orf105O95561 183 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ONECUT2O95948 504 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 CAPN1P07384 714 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 MAGEA3P43357 314 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 EIF3BP55884 814 aaKnown RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 DCDP81605 110 aaKnown RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 SSPNQ14714 243 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 NCF4Q15080 339 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 TTLL9Q3SXZ7 439 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ANKRD20A4Q4UJ75 823 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ZNF385CQ66K41 422 aaPredicted RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 NAPRTQ6XQN6 538 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 LDB1Q86U70 411 aaPredicted RBP15.44■□□□□ 0.06
SGCE-208ENST00000450385 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 LMNTD1Q8N9Z9 388 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 ADAMTS17Q8TE56 1095 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 OSBPL9Q96SU4 736 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 FAM60AQ9NP50 221 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 SPATA7Q9P0W8 599 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
SGCE-208ENST00000450385 MYO18BQ8IUG5 2567 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CCDC88CQ9P219 2028 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 SMAPO00193 183 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 EIF3FO00303 357 aaPredicted RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 PRICKLE3O43900 615 aaPredicted RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 PHF2O75151 1096 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 PKMP14618 531 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 PVRP15151 417 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 TCP1P17987 556 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 CHRM3P20309 590 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CSE1LP55060 971 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 THOC5Q13769 683 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 DHX34Q14147 1143 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 GRB7Q14451 532 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 SF1Q15637 639 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 ZIC1Q15915 447 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CYP2A13Q16696 494 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 FAM214AQ32MH5 1076 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 ATP1A1-AS1Q5TC04 95 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 PAPD7Q5XG87 772 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 TTC27Q6P3X3 843 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 RAB43Q86YS6 212 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 ENDOVQ8N8Q3 282 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 LINC01555Q8NAE3 123 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CFAP61Q8NHU2 1237 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 ANP32BQ92688 251 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 SLCO2A1Q92959 643 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 RUNDC3BQ96NL0 473 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 SERPINB12Q96P63 405 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 NDC1Q9BTX1 674 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CCDC68Q9H2F9 335 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 MLXIPLQ9NP71 852 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 TXLNGQ9NUQ3 528 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 UTP6Q9NYH9 597 aaKnown RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 EURLQ9NYK6 297 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 GPN3Q9UHW5 284 aaPredicted RBP15.43■□□□□ 0.06
SGCE-208ENST00000450385 TLK1Q9UKI8 766 aa15.43■□□□□ 0.06
SGCE-208ENST00000450385 E5RI56 91 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 TTC4O95801 387 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 ALBP02768 609 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 CBSLP0DN79 551 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 ENO3P13929 434 aaPredicted RBP15.42■□□□□ 0.06
SGCE-208ENST00000450385 PEBP1P30086 187 aaKnown RBP15.42■□□□□ 0.06
SGCE-208ENST00000450385 FMO4P31512 558 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 CBSP35520 551 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 RELAQ04206 551 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 TRIP13Q15645 432 aaPredicted RBP15.42■□□□□ 0.06
SGCE-208ENST00000450385 LONRF1Q17RB8 773 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 CTSL3PQ5NE16 218 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 FIGLAQ6QHK4 219 aa15.42■□□□□ 0.06
SGCE-208ENST00000450385 FAM198BQ6UWH4 519 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms