RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SF1Q15637 639 aaKnown RBP12.92□□□□□ -0.34
SNHG4-201ENST00000448190 GPR19Q15760 415 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
SNHG4-201ENST00000448190 DCAF12Q5T6F0 453 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 TMEM164Q5U3C3 297 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 C19orf48Q6RUI8 117 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 SPESP1Q6UW49 350 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 SUSD1Q6UWL2 747 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 NEK10Q6ZWH5 1172 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 PPFIBP2Q8ND30 876 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 OR2L8Q8NGY9 312 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 FLVCR1-AS1Q8TAF5 88 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
SNHG4-201ENST00000448190 SLC41A2Q96JW4 573 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 TRAPPC9Q96Q05 1148 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 CPNE1Q99829 537 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 ACAT2Q9BWD1 397 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 CDC42EP4Q9H3Q1 356 aaKnown RBP12.92□□□□□ -0.34
SNHG4-201ENST00000448190 RHOJQ9H4E5 214 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 C1GALT1Q9NS00 363 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 SIDT1Q9NXL6 827 aaKnown RBP12.92□□□□□ -0.34
SNHG4-201ENST00000448190 LNPEPQ9UIQ6 1025 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 IKZF3Q9UKT9 509 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 UNC13CQ8NB66 2214 aa12.92□□□□□ -0.34
SNHG4-201ENST00000448190 LAMA5O15230 3695 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 PHGDHO43175 533 aaKnown RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 ZBTB11O95625 1053 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 TSPAN12O95859 305 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 PSMB5P28074 263 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 GP5P40197 560 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 GRIA3P42263 894 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 SLC12A2P55011 1212 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 YBX1P67809 324 aaKnown RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 HSD11B2P80365 405 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 ZIC1Q15915 447 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 GRTP1Q5TC63 336 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 MBOAT1Q6ZNC8 495 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 CLEC14AQ86T13 490 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 MAGEC3Q8TD91 643 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 ANKRD49Q8WVL7 239 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 CD180Q99467 661 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 FAM60AQ9NP50 221 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 SEMA5BQ9P283 1151 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.91□□□□□ -0.341e-323■■■□□ 17.6
SNHG4-201ENST00000448190 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 PDE10AQ9Y233 779 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 PCDHGA7Q9Y5G6 932 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 V9GYY5 206 aaPredicted RBP12.91□□□□□ -0.34
SNHG4-201ENST00000448190 CFAP47Q6ZTR5 3102 aa12.91□□□□□ -0.34
SNHG4-201ENST00000448190 TEX51A0A1B0GUA7 166 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MYO1CO00159 1063 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 CDC7O00311 574 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MATN2O00339 956 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 SPAG6O75602 509 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 SLC16A8O95907 504 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MYBL2P10244 700 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 ZNF28P17035 718 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 PHBP35232 272 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 SPRP35270 261 aaPredicted RBP12.9□□□□□ -0.34
SNHG4-201ENST00000448190 PCBP4P57723 403 aaKnown RBP12.9□□□□□ -0.34
SNHG4-201ENST00000448190 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 KIR2DS3Q14952 304 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 PHKG1Q16816 387 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 TMTC4Q5T4D3 741 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 RELL1Q8IUW5 271 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 RASGRP3Q8IV61 690 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 D2HGDHQ8N465 521 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 RAB42Q8N4Z0 105 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MCOLN3Q8TDD5 553 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 CYTH2Q99418 400 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 RBBP8Q99708 897 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 MIPEPQ99797 713 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 GPAMQ9HCL2 828 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 FGF21Q9NSA1 209 aa12.9□□□□□ -0.34
SNHG4-201ENST00000448190 DSPP15924 2871 aaKnown RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 A0A0J9YY10 115 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 A0A1W2PPV9 198 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 KLK10O43240 276 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 HCRTR1O43613 425 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PRICKLE3O43900 615 aaPredicted RBP12.89□□□□□ -0.35
SNHG4-201ENST00000448190 NTRK1P04629 796 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 CTSBP07858 339 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 PNLIPRP1P54315 467 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 POU4F1Q01851 419 aa12.89□□□□□ -0.35
SNHG4-201ENST00000448190 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms