RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 STARD5Q9NSY2 213 aa23.15■■□□□ 1.3
MRPL28-205ENST00000447696 C20orf96Q9NUD7 363 aaPredicted RBP23.15■■□□□ 1.3
MRPL28-205ENST00000447696 KLHL42Q9P2K6 505 aa23.15■■□□□ 1.3
MRPL28-205ENST00000447696 RNF14Q9UBS8 474 aa23.15■■□□□ 1.3
MRPL28-205ENST00000447696 SLC39A10Q9ULF5 831 aa23.15■■□□□ 1.3
MRPL28-205ENST00000447696 MRPS18BQ9Y676 258 aaKnown RBP23.15■■□□□ 1.3
MRPL28-205ENST00000447696 E5RI56 91 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 CCDC188H7C350 402 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 FKBP9O95302 570 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 C1orf105O95561 183 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 TTC4O95801 387 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 KLK3P07288 261 aaPredicted RBP23.14■■□□□ 1.29
MRPL28-205ENST00000447696 IVDP26440 423 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 CCR10P46092 362 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 GPS2Q13227 327 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 ZIC1Q15915 447 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 IZUMO3Q5VZ72 239 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 RAB42Q8N4Z0 105 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 SLC38A9Q8NBW4 561 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 NAT9Q9BTE0 207 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 ACTR5Q9H9F9 607 aaPredicted RBP23.14■■□□□ 1.29
MRPL28-205ENST00000447696 GEMIN8Q9NWZ8 242 aaKnown RBP23.14■■□□□ 1.29
MRPL28-205ENST00000447696 TUBD1Q9UJT1 453 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 COMMD10Q9Y6G5 202 aa23.14■■□□□ 1.29
MRPL28-205ENST00000447696 E7EQ34 232 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 SMAPO00193 183 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 KATNA1O75449 491 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 MATN4O95460 622 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 HBQ1P09105 142 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 RORAP35398 523 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 SLC1A2P43004 574 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 GABRA4P48169 554 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 DR1Q01658 176 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 MORF4L2Q15014 288 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 C16orf46Q6P387 395 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 DENND6AQ8IWF6 608 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 GPR135Q8IZ08 494 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 DSELQ8IZU8 1212 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 HMGCLL1Q8TB92 370 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 N4BP2L2Q92802 583 aaPredicted RBP23.13■■□□□ 1.29
MRPL28-205ENST00000447696 KCNJ9Q92806 393 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 MR1Q95460 341 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 CCDC68Q9H2F9 335 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 FAM60AQ9NP50 221 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 NFS1Q9Y697 457 aa23.13■■□□□ 1.29
MRPL28-205ENST00000447696 MEN1O00255 615 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CREG1O75629 220 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 PAFAH1B1P43034 410 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CLCN7P51798 805 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 POLE2P56282 527 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 RPS15P62841 145 aaKnown RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CTBP1Q13363 440 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CRYMQ14894 314 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 TTLL9Q3SXZ7 439 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CNSTQ6PJW8 725 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 NEK10Q6ZWH5 1172 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 KLHL7Q8IXQ5 586 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 GABPB2Q8TAK5 448 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 CLIP3Q96DZ5 547 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 IL17FQ96PD4 163 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 EBNA1BP2Q99848 306 aaKnown RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 DPH2Q9BQC3 489 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 ACTL8Q9H568 366 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 AKIRIN1Q9H9L7 192 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 FBXO6Q9NRD1 293 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-205ENST00000447696 SPATA7Q9P0W8 599 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 FBXO5Q9UKT4 447 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 AP1M2Q9Y6Q5 423 aa23.12■■□□□ 1.29
MRPL28-205ENST00000447696 H3BMH7 237 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 PTPN4P29074 926 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 BDKRB1P46663 353 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 DHX9Q08211 1270 aaKnown RBP23.11■■□□□ 1.29
MRPL28-205ENST00000447696 PRAMEF17Q5VTA0 474 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 FAM199XQ6PEV8 388 aaPredicted RBP23.11■■□□□ 1.29
MRPL28-205ENST00000447696 KCNMB4Q86W47 210 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 DNAJC22Q8N4W6 341 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 APOBEC4Q8WW27 367 aaKnown RBP23.11■■□□□ 1.29
MRPL28-205ENST00000447696 FAM136AQ96C01 138 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 FAM114A2Q9NRY5 505 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 PCMTD2Q9NV79 361 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 INTS7Q9NVH2 962 aaKnown RBP23.11■■□□□ 1.29
MRPL28-205ENST00000447696 GALPQ9UBC7 116 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 CIDEBQ9UHD4 219 aa23.11■■□□□ 1.29
MRPL28-205ENST00000447696 RUVBL2Q9Y230 463 aaKnown RBP23.11■■□□□ 1.29
MRPL28-205ENST00000447696 SUV39H1O43463 412 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 OR2B3O76000 313 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 RAB40ALP0C0E4 278 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 MAGP20916 626 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 KCNAB2Q13303 367 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 DEFB109BQ30KR1 87 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 HSP90AA5PQ58FG0 334 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 ACSBG2Q5FVE4 666 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 COLEC12Q5KU26 742 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 SPANXN3Q5MJ09 141 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 ATP1A1-AS1Q5TC04 95 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 ZNF549Q6P9A3 640 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 SYVN1Q86TM6 617 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 PDIK1LQ8N165 341 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 DENND1AQ8TEH3 1009 aa23.1■■□□□ 1.29
MRPL28-205ENST00000447696 TRIM4Q9C037 500 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms