RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DERL2Q9GZP9 239 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SYTL2Q9HCH5 934 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 FARSBQ9NSD9 589 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 PRELID1Q9Y255 219 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 HHLA1C9JL84 531 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 H3BRB1 525 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 PEX11BO96011 259 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 SERPINF2P08697 491 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 ATXN1LP0C7T5 689 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 IFNA8P32881 189 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 CA5AP35218 305 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 MRPL19P49406 292 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 FOXD4Q12950 439 aaPredicted RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 KEAP1Q14145 624 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 KIAA0040Q15053 153 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 KDM4DQ6B0I6 523 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 GALNT7Q86SF2 657 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 ENTHD1Q8IYW4 607 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 OR4F6Q8NGB9 312 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 OR52E6Q96RD3 313 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 TXNRD2Q9NNW7 524 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 E9PAM4 449 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 M0R129 80 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 UGT2B10P36537 528 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 HTR2BP41595 481 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 SUOXP51687 545 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 CXCR4P61073 352 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 CD83Q01151 205 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 PTPRNQ16849 979 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 RAB41Q5JT25 222 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 GPSM1Q86YR5 675 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 CYP4Z2PQ8N1L4 340 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 LIX1Q8N485 282 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 TRNT1Q96Q11 434 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 DPY30Q9C005 99 aa13.64□□□□□ -0.23
VPS52-212ENST00000445902 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 SAMHD1Q9Y3Z3 626 aaKnown RBP13.64□□□□□ -0.23
VPS52-212ENST00000445902 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 OR1I1O60431 355 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 CPNE3O75131 537 aaKnown RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 PGRP06401 933 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 KRR1Q13601 381 aaKnown RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 MFSD10Q14728 455 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 DDR2Q16832 855 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 KIAA1614Q5VZ46 1190 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 OR2T5Q6IEZ7 315 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 HORMAD1Q86X24 394 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 OR2T29Q8NH02 315 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 CHAC2Q8WUX2 184 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 LINGO1Q96FE5 620 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 MED30Q96HR3 178 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 GPR83Q9NYM4 423 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 NUFIP1Q9UHK0 495 aaKnown RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 RAPGEFL1Q9UHV5 662 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 IFI30P13284 250 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 RENBPP51606 427 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 ZNF135P52742 658 aaPredicted RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 GPR50Q13585 617 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 ARMC4Q5T2S8 1044 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 FAM171A1Q5VUB5 890 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 RTL3Q8N8U3 475 aaKnown RBP13.63□□□□□ -0.23
VPS52-212ENST00000445902 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 SEMA3CQ99985 751 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 INPP5KQ9BT40 448 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 C1orf109Q9NX04 203 aa13.63□□□□□ -0.23
VPS52-212ENST00000445902 A0A0G2JMP0 313 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 A0A0X1KG70 313 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 FGF10O15520 208 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 RPP40O75818 363 aaKnown RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 RETP07949 1114 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 RUNDC3AQ59EK9 446 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 RAB43Q86YS6 212 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 KBTBD8Q8NFY9 601 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 ZNF675Q8TD23 568 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 MTFMTQ96DP5 389 aaKnown RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 EGLN2Q96KS0 407 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 PPP1R2P1Q96PQ5 205 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 OR2A14Q96R47 310 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 COQ7Q99807 217 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TTPALQ9BTX7 342 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 CLPBQ9H078 707 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 PEX16Q9Y5Y5 336 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 LYVE1Q9Y5Y7 322 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 HS3ST4Q9Y661 456 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms