RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 UGT2B7P16662 529 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 PDHA2P29803 388 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 FOXN2P32314 431 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 HSD17B2P37059 387 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 FAM182AQ5T1J6 154 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ATP1A1-AS1Q5TC04 95 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 VWA5B1Q5TIE3 1220 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ZNF662Q6ZS27 426 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 DCUN1D3Q8IWE4 304 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CLDN19Q8N6F1 224 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 OR1L3Q8NH93 324 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 MIB2Q96AX9 1013 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 MLXIPLQ9NP71 852 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 GPR83Q9NYM4 423 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ANKMY1Q9P2S6 941 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 NXT1Q9UKK6 140 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 TCAF1Q9Y4C2 921 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 FAM169AQ9Y6X4 670 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 PCDH17O14917 1159 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CD3EAPO15446 510 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 PRPF4O43172 522 aaKnown RBP eCLIP7.5□□□□□ -1.21
CD44-211ENST00000442151 PHF2O75151 1096 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 DDAH2O95865 285 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 FURINP09958 794 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 MYBL2P10244 700 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CA5AP35218 305 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 AP2B1P63010 937 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ACVR1Q04771 509 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 HSPA14Q0VDF9 509 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 GRM7Q14831 915 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 BRD3Q15059 726 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 SF1Q15637 639 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 OASLQ15646 514 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 CYP2A13Q16696 494 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 AADACL2Q6P093 401 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CDHR3Q6ZTQ4 885 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 MCATQ8IVS2 390 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 PIANPQ8IYJ0 282 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 SLC22A15Q8IZD6 547 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ZADH2Q8N4Q0 377 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 TRIM58Q8NG06 486 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 OR5AR1Q8NGP9 310 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CPT1CQ8TCG5 803 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 COL26A1Q96A83 441 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 FKBP10Q96AY3 582 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 OR2A14Q96R47 310 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 NAP1L3Q99457 506 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 XKR8Q9H6D3 395 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 MRM3Q9HC36 420 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 FAM114A2Q9NRY5 505 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 GUCA1BQ9UMX6 200 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 CDC14AQ9UNH5 594 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ICKQ9UPZ9 632 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 NAV2Q8IVL1 2488 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 CCL22O00626 93 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 TXNDC9O14530 226 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 ZNF185O15231 689 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 SLCO2B1O94956 709 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 CCNDBP1O95273 360 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 CCDC175P0C221 793 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 GP1BBP13224 206 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 CD9P21926 228 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 RPS3P23396 243 aaKnown RBP eCLIP7.49□□□□□ -1.21
CD44-211ENST00000442151 OTX2P32243 289 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 PTGIRP43119 386 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 CARSP49589 748 aaKnown RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 CDKN1CP49918 316 aaPredicted RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 ABRQ12979 859 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 OLIG2Q13516 323 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 ELOAQ14241 798 aaKnown RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 TTLL9Q3SXZ7 439 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 NKAIN1Q4KMZ8 207 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 ZNF658BQ4V348 819 aaPredicted RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 OTOAQ7RTW8 1153 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 SVOPQ8N4V2 548 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 DNAJC22Q8N4W6 341 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 LILRA3Q8N6C8 439 aaPredicted RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 OTUD6BQ8N6M0 293 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 OR2L8Q8NGY9 312 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 PNPLA2Q96AD5 504 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 EURLQ9NYK6 297 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 SPATA7Q9P0W8 599 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 PACSIN2Q9UNF0 486 aaPredicted RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
CD44-211ENST00000442151 MAST4O15021 2626 aa7.49□□□□□ -1.21
CD44-211ENST00000442151 PYCARD-AS1I3L0S3 204 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 RASGRF2O14827 1237 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 VPS26AO75436 327 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 GPC4O75487 556 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 ONECUT2O95948 504 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 ALAS2P22557 587 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 AOAHP28039 575 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 ATP5DP30049 168 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 CMPK1P30085 196 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 PKLRP30613 574 aa7.48□□□□□ -1.21
CD44-211ENST00000442151 SOX8P57073 446 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms