RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TUBA1BP68363 451 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TUBA1AQ71U36 451 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 EXOSC8Q96B26 276 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 PYURFQ96I23 114 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 CCM2Q9BSQ5 444 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 NME6O75414 186 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SNAI1O95863 264 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SPATA31D3P0C874 917 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 ACVRL1P37023 503 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TAF13Q15543 124 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SF1Q15637 639 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 UPP1Q16831 310 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TNFAIP8L3Q5GJ75 292 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SPATA31D4Q6ZUB0 917 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TREML1Q86YW5 311 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 MARVELD2Q8N4S9 558 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 DCAF4L2Q8NA75 395 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 OR2AP1Q8NGE2 309 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 ACAT2Q9BWD1 397 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TRNAU1APQ9NX07 287 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 TAS2R7Q9NYW3 318 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SPATA7Q9P0W8 599 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 RGS8P57771 180 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 RPS24P62847 133 aaKnown RBP12.62□□□□□ -0.39
BRPF3-203ENST00000441123 ATP6AP1Q15904 470 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 IQCCQ4KMZ1 466 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 BIRC7Q96CA5 298 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SLC45A3Q96JT2 553 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 SPACA7Q96KW9 195 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
BRPF3-203ENST00000441123 RIIAD1A6NNX1 92 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 GTPBP1O00178 669 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CLIC1O00299 241 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ATP1B2P14415 290 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 FPR1P21462 350 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CRISP3P54108 245 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ZNF252P-AS1Q0IIN9 211 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 GALNT1Q10472 559 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PLET1Q6UQ28 207 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 LYSMD3Q7Z3D4 306 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PIM3Q86V86 326 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 OR10G2Q8NGC3 310 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 OMA1Q96E52 524 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 S100A13Q99584 98 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TUBA1CQ9BQE3 449 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CCSER2Q9H7U1 834 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 SMURF2Q9HAU4 748 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ARVCFO00192 962 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 C9P02748 559 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 MAGEA6P43360 314 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ZNF773Q6PK81 442 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 MAPKAP1Q9BPZ7 522 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CD244Q9BZW8 370 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TM9SF3Q9HD45 589 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ABCB8Q9NUT2 735 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 EFCAB9A8MZ26 197 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 SDHDO14521 159 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 SLC16A5O15375 505 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 RSL1D1O76021 490 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 AGR2O95994 175 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CD1DP15813 335 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CKMT2P17540 419 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 GSTM3P21266 225 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 S100A1P23297 94 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 SRP54P61011 504 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PEG10Q86TG7 708 aaKnown RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PPP1R14AQ96A00 147 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 IRAK3Q9Y616 596 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 A0A1W2PRB8 838 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CDC7O00311 574 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 WNT9AO14904 365 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 GPR32O75388 356 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CCNKO75909 580 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TBX18O95935 607 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 UFM1P61960 85 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
BRPF3-203ENST00000441123 CCL14Q16627 93 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 RNF44Q7L0R7 432 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 COMMD2Q86X83 199 aa12.61□□□□□ -0.39
BRPF3-203ENST00000441123 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms