RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RASGRF2O14827 1237 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ZSCAN9O15535 394 aaPredicted RBP19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 NIPSNAP2O75323 286 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 S1PR4O95977 384 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ESR1P03372 595 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 RAB40ALP0C0E4 278 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 TPBGLP0DKB5 382 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 MLNP12872 115 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 MAGP20916 626 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ARNTP27540 789 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 RORAP35398 523 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 MAGEA6P43360 314 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 SF1Q15637 639 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 TYSND1Q2T9J0 566 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ZNF789Q5FWF6 425 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 CTSL3PQ5NE16 218 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ZNF470Q6ECI4 717 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 OR2L8Q8NGY9 312 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 MAGEC3Q8TD91 643 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 COG1Q8WTW3 980 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 LPGAT1Q92604 370 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 NLNQ9BYT8 704 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ACSS2Q9NR19 701 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 SRPK3Q9UPE1 567 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 PLCL2Q9UPR0 1127 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 RUVBL2Q9Y230 463 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 ARGFXA6NJG6 315 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 PEBP1P30086 187 aaKnown RBP19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 CCNFP41002 786 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 FNTAP49354 379 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 KCNC4Q03721 635 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 NCF4Q15080 339 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 ZIC1Q15915 447 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 CYP1B1Q16678 543 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 C1orf189Q5VU69 101 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 NEPROQ6NW34 567 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM198BQ6UWH4 519 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 ZNF517Q6ZMY9 492 aaPredicted RBP19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM20CQ8IXL6 584 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 ZNF655Q8N720 491 aaPredicted RBP19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 LINC01555Q8NAE3 123 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 SERPINB12Q96P63 405 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 NDC1Q9BTX1 674 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 CLMPQ9H6B4 373 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 IL1RAPL1Q9NZN1 696 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 NDOR1Q9UHB4 597 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 ANAPC2Q9UJX6 822 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 TCFL5Q9UL49 500 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 G3BP2Q9UN86 482 aaKnown RBP19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 KLHL20Q9Y2M5 609 aa19.13■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM237BA0A1B0GVD1 139 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 MAGEB16A2A368 324 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 DNAJB5O75953 348 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 WISP1O95388 367 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 TLE1Q04724 770 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 MLIPQ5VWP3 458 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 LCN10Q6JVE6 187 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 TLDC1Q6P9B6 456 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 CAND1Q86VP6 1230 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 RAB43Q86YS6 212 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 CILP2Q8IUL8 1156 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 ZBTB2Q8N680 514 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 LMNTD1Q8N9Z9 388 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 MCUQ8NE86 351 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 FLVCR1-AS1Q8TAF5 88 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 ACTRT1Q8TDG2 376 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 TRIM56Q9BRZ2 755 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 CHRNA10Q9GZZ6 450 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 SPRTNQ9H040 489 aaPredicted RBP19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 INTS10Q9NVR2 710 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 ASIC3Q9UHC3 531 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 TLK1Q9UKI8 766 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 NFS1Q9Y697 457 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 BSNQ9UPA5 3926 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 CCDC88CQ9P219 2028 aa19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 TNRC6AQ8NDV7 1962 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-204ENST00000440118 PKMP14618 531 aaKnown RBP19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 NR1D1P20393 614 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 CHAF1BQ13112 559 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 TTLL9Q3SXZ7 439 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 ANKRD20A4Q4UJ75 823 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 CPZQ66K79 652 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 ASB18Q6ZVZ8 466 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 APLFQ8IW19 511 aaPredicted RBP19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 REXO1L1PQ8IX06 675 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 PROKR1Q8TCW9 393 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 DLG3Q92796 817 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 BIRC8Q96P09 236 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 DHRS4Q9BTZ2 278 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 C20orf96Q9NUD7 363 aaPredicted RBP19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 IFT80Q9P2H3 777 aaPredicted RBP19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 SNX12Q9UMY4 172 aa19.11■□□□□ 0.65
SHROOM1-204ENST00000440118 PCM1Q15154 2024 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 C1orf105O95561 183 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 ATP5DP30049 168 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 OTX2P32243 289 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 PTGIRP43119 386 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 CSRP3P50461 194 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 PGDP52209 483 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 KLRB1Q12918 225 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms