RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 AQP12AQ8IXF9 295 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 FBXO15Q8NCQ5 510 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-216ENST00000437340 ADCY4Q8NFM4 1077 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 OR2T34Q8NGX1 318 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 OR2T3Q8NH03 318 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 CXorf40AQ8TE69 158 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 LINC00615Q96LM1 132 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-216ENST00000437340 RIPOR3Q96MK2 946 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 COPS7BQ9H9Q2 264 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-216ENST00000437340 TRIM39Q9HCM9 518 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 ACTR3BQ9P1U1 418 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 EYSQ5T1H1 3165 aa25.01■■□□□ 1.6
CPNE1-216ENST00000437340 LILRB5O75023 590 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 PREPP48147 710 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 PLOD1Q02809 727 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-216ENST00000437340 PCDH1Q08174 1060 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 BLMHQ13867 455 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 GRM2Q14416 872 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 LCN8Q6JVE9 175 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 FAM9CQ8IZT9 166 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 LILRA2Q8N149 483 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 ELSPBP1Q96BH3 223 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 PLA2G2FQ9BZM2 168 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 ATG10Q9H0Y0 220 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 FAM8A1Q9UBU6 413 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 HCN2Q9UL51 889 aa25.01■■□□□ 1.59
CPNE1-216ENST00000437340 JUPP14923 745 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 P2RY2P41231 377 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 GTF2H3Q13889 308 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 SFT2D3Q587I9 215 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 HABP4Q5JVS0 413 aaKnown RBP25■■□□□ 1.59
CPNE1-216ENST00000437340 HID1Q8IV36 788 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 KIAA2013Q8IYS2 634 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 DNAJB14Q8TBM8 379 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 BTBD9Q96Q07 612 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 EFHD1Q9BUP0 239 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 TMED5Q9Y3A6 229 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 DTNAQ9Y4J8 743 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 FADS3Q9Y5Q0 445 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 K7ESM1 405 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 PLK4O00444 970 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 VEGFDO43915 354 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 DNAJA2O60884 412 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 ACPPP15309 386 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 ITPKAP23677 461 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 GRAMD1BQ3KR37 738 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 FRG2Q64ET8 278 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 PTRH1Q86Y79 214 aaKnown RBP25■■□□□ 1.59
CPNE1-216ENST00000437340 LIX1Q8N485 282 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 FRG2BQ96QU4 278 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 NR1H4Q96RI1 486 aaPredicted RBP25■■□□□ 1.59
CPNE1-216ENST00000437340 PKP2Q99959 881 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 DPY30Q9C005 99 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 OR2AG1Q9H205 316 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 ALG2Q9H553 416 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 STOX2Q9P2F5 926 aaPredicted RBP25■■□□□ 1.59
CPNE1-216ENST00000437340 GULP1Q9UBP9 304 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 GPR34Q9UPC5 381 aa25■■□□□ 1.59
CPNE1-216ENST00000437340 C17orf113A0A1B0GUU1 675 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 H3BM21 787 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 RNASEH2AO75792 299 aaKnown RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 IL6P05231 212 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 MTHFRP42898 656 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 MRPS35P82673 323 aaKnown RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 CHIT1Q13231 466 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 USP39Q53GS9 565 aaKnown RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 NANOGP8Q6NSW7 305 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 SLC2A7Q6PXP3 512 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 AGTRAPQ6RW13 159 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 DLEU7Q6UYE1 221 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 CYP2R1Q6VVX0 501 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 THOC6Q86W42 341 aaKnown RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 TICAM1Q8IUC6 712 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 LILRA3Q8N6C8 439 aaPredicted RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 TMEM102Q8N9M5 508 aaPredicted RBP24.99■■□□□ 1.59
CPNE1-216ENST00000437340 CHFRQ96EP1 664 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 CMTM7Q96FZ5 175 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 NANOGQ9H9S0 305 aa24.99■■□□□ 1.59
CPNE1-216ENST00000437340 APODP05090 189 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PRPS2P11908 318 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 MAPK1P28482 360 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 HALP42357 657 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 CASP2P42575 452 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 CNTN1Q12860 1018 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PWP1Q13610 501 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 ENPP2Q13822 863 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PTGR1Q14914 329 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 EGFLAMQ63HQ2 1017 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 TRAPPC5Q8IUR0 188 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 SMRP1Q8NCR6 262 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 ICA1LQ8NDH6 482 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 MTFMTQ96DP5 389 aaKnown RBP24.98■■□□□ 1.59
CPNE1-216ENST00000437340 UHRF1Q96T88 793 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-216ENST00000437340 SLAMF8Q9P0V8 285 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 LRRK1Q38SD2 2015 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PRAMEF4O60810 478 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 LAMP2P13473 410 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 ATP6V1B2P21281 511 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 GSK3BP49841 420 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 AQP4P55087 323 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms