RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TMEM8BA6NDV4 472 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 SLC9B1P1A6NJY1 282 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 PHGDHO43175 533 aaKnown RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 TPBGLP0DKB5 382 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 FGF3P11487 239 aaPredicted RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 RPA3P35244 121 aaPredicted RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 ETV5P41161 510 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 MSH2P43246 934 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 RAB15P59190 212 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 RAB10P61026 200 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 HSD11B2P80365 405 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 BMPR2Q13873 1038 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 KCNAB1Q14722 419 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 SF1Q15637 639 aaKnown RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 DCAF12Q5T6F0 453 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 MROH9Q5TGP6 573 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 CEP97Q8IW35 865 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 ALKBH8Q96BT7 664 aaKnown RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 PRR11Q96HE9 360 aaPredicted RBP15.01□□□□□ -0.01
TREX1-201ENST00000433541 PPM1MQ96MI6 270 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 CNTNAP3BQ96NU0 1288 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 OR6C1Q96RD1 312 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 TAAR9Q96RI9 348 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 PAFAH2Q99487 392 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 PKP4Q99569 1192 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 CTRCQ99895 268 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 CNTNAP3Q9BZ76 1288 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 ANKZF1Q9H8Y5 726 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 FANCEQ9HB96 536 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 POPDC3Q9HBV1 291 aa15.01□□□□□ -0.01
TREX1-201ENST00000433541 FRYQ5TBA9 3013 aa15□□□□□ -0.01
TREX1-201ENST00000433541 A0A0J9YY10 115 aa15□□□□□ -0.01
TREX1-201ENST00000433541 NPEPPSL1A6NEC2 478 aa15□□□□□ -0.01
TREX1-201ENST00000433541 POLR1CO15160 346 aaPredicted RBP15□□□□□ -0.01
TREX1-201ENST00000433541 RIPK2O43353 540 aa15□□□□□ -0.01
TREX1-201ENST00000433541 PRAMEF10O60809 474 aa15□□□□□ -0.01
TREX1-201ENST00000433541 GUCA1CO95843 209 aa15□□□□□ -0.01
TREX1-201ENST00000433541 EBLN1P0CF75 366 aa15□□□□□ -0.01
TREX1-201ENST00000433541 MYBL2P10244 700 aa15□□□□□ -0.01
TREX1-201ENST00000433541 PVRP15151 417 aa15□□□□□ -0.01
TREX1-201ENST00000433541 NELFEP18615 380 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 TNFRSF8P28908 595 aa15□□□□□ -0.01
TREX1-201ENST00000433541 HSD17B2P37059 387 aa15□□□□□ -0.01
TREX1-201ENST00000433541 PNLIPRP1P54315 467 aa15□□□□□ -0.01
TREX1-201ENST00000433541 SH3BP2P78314 561 aa15□□□□□ -0.01
TREX1-201ENST00000433541 TUBB3Q13509 450 aa15□□□□□ -0.01
TREX1-201ENST00000433541 GRB7Q14451 532 aa15□□□□□ -0.01
TREX1-201ENST00000433541 TBC1D25Q3MII6 688 aa15□□□□□ -0.01
TREX1-201ENST00000433541 TAF1BQ53T94 588 aaPredicted RBP15□□□□□ -0.01
TREX1-201ENST00000433541 SUSD1Q6UWL2 747 aa15□□□□□ -0.01
TREX1-201ENST00000433541 CYHR1Q6ZMK1 362 aa15□□□□□ -0.01
TREX1-201ENST00000433541 TBC1D1Q86TI0 1168 aaPredicted RBP15□□□□□ -0.01
TREX1-201ENST00000433541 KMT5CQ86Y97 462 aa15□□□□□ -0.01
TREX1-201ENST00000433541 RASGRP3Q8IV61 690 aa15□□□□□ -0.01
TREX1-201ENST00000433541 CARFQ8N187 725 aa15□□□□□ -0.01
TREX1-201ENST00000433541 EIF1ADQ8N9N8 165 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 LINC01555Q8NAE3 123 aa15□□□□□ -0.01
TREX1-201ENST00000433541 MED8Q96G25 268 aa15□□□□□ -0.01
TREX1-201ENST00000433541 NAF1Q96HR8 494 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 ZNF578Q96N58 590 aaPredicted RBP15□□□□□ -0.01
TREX1-201ENST00000433541 SLC46A1Q96NT5 459 aa15□□□□□ -0.01
TREX1-201ENST00000433541 OR2A14Q96R47 310 aa15□□□□□ -0.01
TREX1-201ENST00000433541 CCDC77Q9BR77 488 aa15□□□□□ -0.01
TREX1-201ENST00000433541 ACAT2Q9BWD1 397 aa15□□□□□ -0.01
TREX1-201ENST00000433541 UNKQ9C0B0 810 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 PARVBQ9HBI1 364 aa15□□□□□ -0.01
TREX1-201ENST00000433541 PDE7BQ9NP56 450 aa15□□□□□ -0.01
TREX1-201ENST00000433541 INTS7Q9NVH2 962 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 IRAK4Q9NWZ3 460 aa15□□□□□ -0.01
TREX1-201ENST00000433541 ARL15Q9NXU5 204 aa15□□□□□ -0.01
TREX1-201ENST00000433541 UTP6Q9NYH9 597 aaKnown RBP15□□□□□ -0.01
TREX1-201ENST00000433541 CTNNAL1Q9UBT7 734 aa15□□□□□ -0.01
TREX1-201ENST00000433541 ADAMTS6Q9UKP5 1117 aa15□□□□□ -0.01
TREX1-201ENST00000433541 GFYI3L273 518 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 MYO1CO00159 1063 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 SLC16A5O15375 505 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 SLC16A8O95907 504 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 C1QAP02745 245 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 CCDC166P0CW27 439 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 ST6GAL1P15907 406 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 PSMB5P28074 263 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 OAS2P29728 719 aaKnown RBP14.99□□□□□ -0.01
TREX1-201ENST00000433541 SLC5A2P31639 672 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 SERPINB9P50453 376 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 PCBP4P57723 403 aaKnown RBP14.99□□□□□ -0.01
TREX1-201ENST00000433541 ERVPABLB-1P60509 514 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 VSNL1P62760 191 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 ACY1Q03154 408 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 CSHL1Q14406 222 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 CEACAM20Q6UY09 585 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 CMC1Q7Z7K0 106 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 C19orf47Q8N9M1 422 aaKnown RBP14.99□□□□□ -0.01
TREX1-201ENST00000433541 PPFIBP2Q8ND30 876 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.99□□□□□ -0.01
TREX1-201ENST00000433541 KLHL6Q8WZ60 621 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 SMPDL3AQ92484 453 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 FGF11Q92914 225 aa14.99□□□□□ -0.01
TREX1-201ENST00000433541 RNF31Q96EP0 1072 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms