RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 EPHX4Q8IUS5 362 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ULK2Q8IYT8 1036 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC44A3Q8N4M1 653 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 WDR36Q8NI36 951 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC22A8Q8TCC7 542 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF483Q8TF39 744 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 FER1L6-AS2Q96M78 137 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PLEKHG4BQ96PX9 1271 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 GBA3Q9H227 469 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NOD2Q9HC29 1040 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 UPB1Q9UBR1 384 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PHF11Q9UIL8 331 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PLCL2Q9UPR0 1127 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 RUVBL1Q9Y265 456 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 MFHAS1Q9Y4C4 1052 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PCDHGB5Q9Y5G0 923 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 hCG_1818297A0A087WSY0 165 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 C2CD4BA6NLJ0 364 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 A8MVJ9 347 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 M0QZQ0 153 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KLK10O43240 276 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ATP8B1O43520 1251 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ABLIM3O94929 683 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 OR6B1O95007 311 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 EFEMP2O95967 443 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 GSRP00390 522 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SERPINE1P05121 402 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZSCAN5DPP0CG00 497 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NR2C1P13056 603 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 C6P13671 934 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ADRB3P13945 408 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF37AP17032 561 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CSNK2A2P19784 350 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 GKP32189 559 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ERFP50548 548 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 RGS8P57771 180 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 HSPB3Q12988 150 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SEMA5AQ13591 1074 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CCDC142Q17RM4 750 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 HKDC1Q2TB90 917 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 BTBD16Q32M84 506 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KIAA0895LQ68EN5 471 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NUDT13Q86X67 352 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ARMC8Q8IUR7 673 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZADH2Q8N4Q0 377 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 OR6N1Q8NGY5 312 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ACTRT2Q8TDY3 377 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SCAMP4Q969E2 229 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZMAT2Q96NC0 199 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 HPF1Q9NWY4 346 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 HMGXB4Q9UGU5 601 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 AP3M1Q9Y2T2 418 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CDC14CA4D256 554 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 NPEPPSL1A6NEC2 478 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ALOX5P09917 674 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SAGP10523 405 aaPredicted RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 PPIBP23284 216 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ASPAP45381 313 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 HSPA7P48741 367 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SOX4Q06945 474 aaPredicted RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 KLC1Q07866 573 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 TUBB3Q13509 450 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 PARM1Q6UWI2 310 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SPATA21Q7Z572 469 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF761Q86XN6 746 aaPredicted RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF100Q8IYN0 542 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 MRPL57Q9BQC6 102 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 FNDC11Q9BVV2 318 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ULBP3Q9BZM4 244 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CEP44Q9C0F1 390 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ISCUQ9H1K1 167 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 MVB12BQ9H7P6 319 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 APOBEC3GQ9HC16 384 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 HHATLQ9HCP6 504 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 NGBQ9NPG2 151 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 TCF7L2Q9NQB0 619 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SCDO00767 359 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 AQP9O43315 295 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CCNB2O95067 398 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CPNE6O95741 557 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 GOT2P00505 430 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CD46P15529 392 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF23P17027 643 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SLC6A2P23975 617 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 GRIA3P42263 894 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 CAPZA1P52907 286 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 EMP2P54851 167 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 RACK1P63244 317 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 DNAJC3Q13217 504 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 MRPL49Q13405 166 aaKnown RBP7.06□□□□□ -1.28
CNOT4-206ENST00000428680 SLC35G1Q2M3R5 365 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 GPRC6AQ5T6X5 926 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 TSTD2Q5T7W7 516 aa7.06□□□□□ -1.28
CNOT4-206ENST00000428680 LIX1LQ8IVB5 337 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms