RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GUCA1BQ9UMX6 200 aa14.93□□□□□ -0.02
SEC13-210ENST00000428626 VPS4AQ9UN37 437 aa14.93□□□□□ -0.02
SEC13-210ENST00000428626 PLCL2Q9UPR0 1127 aa14.93□□□□□ -0.02
SEC13-210ENST00000428626 PCDHGB7Q9Y5F8 929 aa14.93□□□□□ -0.02
SEC13-210ENST00000428626 MDC1Q14676 2089 aaKnown RBP14.93□□□□□ -0.02
SEC13-210ENST00000428626 PCM1Q15154 2024 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 CNTRLQ7Z7A1 2325 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 UNC79Q9P2D8 2635 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 E7EVH7 732 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 PRICKLE3O43900 615 aaPredicted RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 NRP2O60462 931 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 DPM1O60762 260 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 SEMA7AO75326 666 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 SLCO2B1O94956 709 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 CD9P21926 228 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 MCM3P25205 808 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 ARNTP27540 789 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 CDC25BP30305 580 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 GRIA3P42263 894 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 PRAMEP78395 509 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 SSPNQ14714 243 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 NKAIN1Q4KMZ8 207 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 FASTKD1Q53R41 847 aaKnown RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 RAB43Q86YS6 212 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 SPNS2Q8IVW8 549 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 OR2Y1Q8NGV0 311 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 PROKR1Q8TCW9 393 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 C19orf60Q96EN9 201 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 FRMD8P1Q9BZ68 369 aaPredicted RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 P2RY12Q9H244 342 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 ZBTB20Q9HC78 741 aaPredicted RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 TREX1Q9NSU2 369 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 IFT80Q9P2H3 777 aaPredicted RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 RUVBL2Q9Y230 463 aaKnown RBP14.92□□□□□ -0.02
SEC13-210ENST00000428626 PADI2Q9Y2J8 665 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 NFS1Q9Y697 457 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 NOTCH2Q04721 2471 aa14.92□□□□□ -0.02
SEC13-210ENST00000428626 TEX15Q9BXT5 2789 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 TCP11X1B4DZS4 312 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 PRMT5O14744 637 aaPredicted RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 KRT86O43790 486 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 GAS8O95995 478 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 NMBRP28336 390 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 FOLR3P41439 243 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 RRADP55042 308 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 SESN2P58004 480 aaPredicted RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 MRPL49Q13405 166 aaKnown RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 DCAF10Q5QP82 559 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 MEI1Q5TIA1 1274 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 TLDC1Q6P9B6 456 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 COX15Q7KZN9 410 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 MCATQ8IVS2 390 aaKnown RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 DCUN1D3Q8IWE4 304 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 OR2L8Q8NGY9 312 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 ASZ1Q8WWH4 475 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 PEX13Q92968 403 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 ZNF552Q9H707 407 aaPredicted RBP14.91□□□□□ -0.02
SEC13-210ENST00000428626 CATSPERZQ9NTU4 200 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 P4HTMQ9NXG6 502 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 PAK5Q9P286 719 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
SEC13-210ENST00000428626 CD3EAPO15446 510 aaKnown RBP14.9□□□□□ -0.02
SEC13-210ENST00000428626 ALOX12BO75342 701 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 MED26O95402 600 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 PSMB5P28074 263 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 BDKRB1P46663 353 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 YBX1P67809 324 aaKnown RBP14.9□□□□□ -0.02
SEC13-210ENST00000428626 PCID2Q5JVF3 399 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 CTSL3PQ5NE16 218 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 FIGLAQ6QHK4 219 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 TTLL10Q6ZVT0 673 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 NLRP9Q7RTR0 991 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 GALNT16Q8N428 558 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 PPHLN1Q8NEY8 458 aaKnown RBP14.9□□□□□ -0.02
SEC13-210ENST00000428626 DENND1AQ8TEH3 1009 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 PNPLA2Q96AD5 504 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 TTC1Q99614 292 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 MESP1Q9BRJ9 268 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 TXLNGQ9NUQ3 528 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 IRAK4Q9NWZ3 460 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 NDOR1Q9UHB4 597 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 GPN3Q9UHW5 284 aaPredicted RBP14.9□□□□□ -0.02
SEC13-210ENST00000428626 SRPK3Q9UPE1 567 aa14.9□□□□□ -0.02
SEC13-210ENST00000428626 DOPEY1Q5JWR5 2465 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 TCRBV7S3A2A0A539 114 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 RASGRF2O14827 1237 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 CTSVO60911 334 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 APOA4P06727 396 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 KCNJ1P48048 391 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 MYBPC3Q14896 1274 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 CCNG2Q16589 344 aa14.89□□□□□ -0.03
SEC13-210ENST00000428626 EIF2S3LQ2VIR3 472 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms