RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 RAB21Q9UL25 225 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 FZD4Q9ULV1 537 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 PLA2G4CQ9UP65 541 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 STYXL1Q9Y6J8 313 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 DGKBQ9Y6T7 804 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 RNF215Q9Y6U7 377 aa3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 DIDO1Q9BTC0 2240 aaKnown RBP3.35□□□□□ -1.87
CNKSR3-201ENST00000424998 UNC13CQ8NB66 2214 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 VPS13CQ709C8 3753 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 EFCAB8A8MWE9 144 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PRAMEF26H0Y7S4 382 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 M0QYT0 321 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 M0R3H8 397 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TULP2O00295 520 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CTIFO43310 598 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 HNRNPRO43390 633 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 RAD1O60671 282 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PFKFB2O60825 505 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CNTN5O94779 1100 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SORBS2O94875 1100 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 RHOBTB3O94955 611 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 LUC7L3O95232 432 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CSF2P04141 144 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CTSLP07711 333 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TMIGD3P0DMS9 266 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 DLATP10515 647 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 FGF3P11487 239 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 XBP1P17861 261 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 KRT4P19013 534 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 POLR2EP19388 210 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 GPD1P21695 349 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 MMP8P22894 467 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PAX3P23760 479 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CCKBRP32239 447 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 GALNSP34059 522 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ZNF131P52739 623 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PRKAA2P54646 552 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 GOLGA8FQ08AF8 430 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 GOLGA8DPQ0D2H9 430 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CUL4BQ13620 913 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PDE1CQ14123 709 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 MAPRE1Q15691 268 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 KYAT1Q16773 422 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ZNF284Q2VY69 593 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TMEM119Q4V9L6 283 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 C4orf46Q504U0 113 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SETMARQ53H47 684 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 FAM133BQ5BKY9 247 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 RNASE12Q5GAN4 147 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PIP5KL1Q5T9C9 394 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 KRT79Q5XKE5 535 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 NADSYN1Q6IA69 706 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SPOPLQ6IQ16 392 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TMEM65Q6PI78 240 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TRAPPC11Q7Z392 1133 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TIPARPQ7Z3E1 657 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TRABD2AQ86V40 505 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 IQCHQ86VS3 1027 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TRIM69Q86WT6 500 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 FAM217AQ8IXS0 508 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CARNMT1Q8N4J0 409 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 GPR150Q8NGU9 434 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 STARD8Q92502 1023 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CCDC127Q96BQ5 260 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 DAZAP1Q96EP5 407 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ZNF274Q96GC6 653 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SMARCD1Q96GM5 515 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 FAR2Q96K12 515 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CEP295NLQ96MC4 621 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TSPAN18Q96SJ8 248 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 IL12RB2Q99665 862 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 MECRQ9BV79 373 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SCAND2PQ9GZW5 306 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 VPS16Q9H269 839 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PARVGQ9HBI0 331 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 PRDM8Q9NQV8 689 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 BLOC1S4Q9NUP1 217 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 TMEM9Q9P0T7 183 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 LARSQ9P2J5 1176 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 RCOR3Q9P2K3 495 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SLC17A6Q9P2U8 582 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 XPO7Q9UIA9 1087 aaKnown RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 DAPP1Q9UN19 280 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 C19orf53Q9UNZ5 99 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 CNTN6Q9UQ52 1028 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 SCML2Q9UQR0 700 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ITM2BQ9Y287 266 aa3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 UBE2J1Q9Y385 318 aaPredicted RBP3.34□□□□□ -1.87
CNKSR3-201ENST00000424998 ARHGEF17Q96PE2 2063 aaPredicted RBP3.34□□□□□ -1.88
CNKSR3-201ENST00000424998 STAB1Q9NY15 2570 aa3.33□□□□□ -1.88
CNKSR3-201ENST00000424998 SPTY2D1-AS1A0A0U1RR47 76 aa3.33□□□□□ -1.88
CNKSR3-201ENST00000424998 EDDM13A0A1B0GTR0 161 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms