RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ANAPC2Q9UJX6 822 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 ABT1Q9ULW3 272 aaKnown RBP3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 PPIEQ9UNP9 301 aaKnown RBP3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 TMED3Q9Y3Q3 217 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 PASKQ96RG2 1323 aa3.9□□□□□ -1.79
HMGB1P49-201ENST00000418882 IGKV3D-15A0A087WSY6 115 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 A0A1W2PPQ1 181 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 ANKRD61A6NGH8 418 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 TRUB2O95900 331 aaKnown RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 TBX6O95947 436 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 PFKFB1P16118 471 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 MNDAP41218 407 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 BMXP51813 675 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 IRX1P78414 480 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 HNRNPDQ14103 355 aaKnown RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 UGT3A2Q3SY77 523 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 PSRC1Q6PGN9 363 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 IL27RAQ6UWB1 636 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 FAM198BQ6UWH4 519 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 NUP54Q7Z3B4 507 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 KIRREL3Q8IZU9 778 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 TC2NQ8N9U0 490 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 PIGBQ92521 554 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 NUDT16L1Q9BRJ7 211 aaKnown RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 CNOT10Q9H9A5 744 aaKnown RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 GKN1Q9NS71 199 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 FGF21Q9NSA1 209 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 P4HTMQ9NXG6 502 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 DPP3Q9NY33 737 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 BARHL2Q9NY43 387 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 KLHL8Q9P2G9 620 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 ASIC3Q9UHC3 531 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
HMGB1P49-201ENST00000418882 NOTCH3Q9UM47 2321 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 ZNF195O14628 629 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 TCERG1O14776 1098 aaKnown RBP3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 DFFBO76075 338 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLCO2B1O94956 709 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CLDN1O95832 211 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 IGHV2-70P01814 119 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 ABCB1P08183 1280 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 LINGO3P0C6S8 592 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 IL11P20809 199 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CA6P23280 308 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 MATR3P43243 847 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CCR3P51677 355 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 MAPK12P53778 367 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 SNRPD1P62314 119 aaKnown RBP3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 TOMM20Q15388 145 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 LACC1Q8IV20 430 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 MMD2Q8IY49 270 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CDK20Q8IZL9 346 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 BMPERQ8N8U9 685 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 ZNF485Q8NCK3 441 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 HCAR2Q8TDS4 363 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CCDC107Q8WV48 283 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 DYRK2Q92630 601 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLAMF9Q96A28 289 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 POM121L2Q96KW2 1035 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 SFXN2Q96NB2 322 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 CCDC3Q9BQI4 270 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 STUB1Q9UNE7 303 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 PPP2R2CQ9Y2T4 447 aa3.88□□□□□ -1.79
HMGB1P49-201ENST00000418882 A0A1W2PPK0 400 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 NEMP2A6NFY4 417 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 ENO4A6NNW6 628 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 PTGESO14684 152 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 TADA2AO75478 443 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 MOCS3O95396 460 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 CD27P26842 260 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 MC5RP33032 325 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 PTGER4P35408 488 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLC6A12P48065 614 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 LUMP51884 338 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 HSPB3Q12988 150 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 SNTB1Q13884 538 aaKnown RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 TAF13Q15543 124 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 VWC2Q2TAL6 325 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 LETM2Q2VYF4 491 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 XKR6Q5GH73 641 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 WDR78Q5VTH9 848 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 BTN2A1Q7KYR7 527 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 PCGF5Q86SE9 256 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 THAP8Q8NA92 274 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 AVL9Q8NBF6 648 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 AZIN2Q96A70 460 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 URM1Q9BTM9 101 aaKnown RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 THAP2Q9H0W7 228 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 NOL11Q9H8H0 719 aaKnown RBP3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 EPHA6Q9UF33 1036 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 ANGPTL3Q9Y5C1 460 aa3.87□□□□□ -1.79
HMGB1P49-201ENST00000418882 KLF11O14901 512 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 EXTL3O43909 919 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 CRLF1O75462 422 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 LDHCP07864 332 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms