RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ITPKAP23677 461 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 PTK2BQ14289 1009 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 THOC6Q86W42 341 aaKnown RBP20.18■□□□□ 0.82
CASC3-203ENST00000418132 HOMEZQ8IX15 550 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 TBC1D21Q8IYX1 336 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 SNX31Q8N9S9 440 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 INSM2Q96T92 566 aaPredicted RBP20.18■□□□□ 0.82
CASC3-203ENST00000418132 CCT7Q99832 543 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 INVSQ9Y283 1065 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 DGKBQ9Y6T7 804 aa20.18■□□□□ 0.82
CASC3-203ENST00000418132 SCAMP1O15126 338 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 HGFP14210 728 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 NCF2P19878 526 aaPredicted RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 CD27P26842 260 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 KRT72Q14CN4 511 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 UAP1L1Q3KQV9 507 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 NXNQ6DKJ4 435 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 LARP4Q71RC2 724 aaKnown RBP eCLIP20.17■□□□□ 0.821e-6■■■□□ 19.2
CASC3-203ENST00000418132 RD3Q7Z3Z2 195 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 C12orf66Q96MD2 445 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 TRIT1Q9H3H1 467 aaKnown RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 TRNAU1APQ9NX07 287 aaKnown RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 BTRCQ9Y297 605 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 CFAP20Q9Y6A4 193 aaKnown RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 SLCO1B1Q9Y6L6 691 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 SPTY2D1-AS1A0A0U1RR47 76 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 PI15O43692 258 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 CLDN9O95484 217 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 PDGFBP01127 241 aaPredicted RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 THEGLP0DJG4 465 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 CTBSQ01459 385 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 UBAP2LQ14157 1087 aaKnown RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 GGTA1PQ4G0N0 100 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 DDIASQ8IXT1 998 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 LRRC56Q8IYG6 542 aaPredicted RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 PPFIBP2Q8ND30 876 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 SLC7A6OSQ96CW6 309 aaPredicted RBP20.17■□□□□ 0.82
CASC3-203ENST00000418132 MED8Q96G25 268 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 SPACA7Q96KW9 195 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 SLC6A18Q96N87 628 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 LRMDAQ9H2I8 198 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 ACTR8Q9H981 624 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 PFDN4Q9NQP4 134 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 RNF11Q9Y3C5 154 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 PTGDR2Q9Y5Y4 395 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 EML5Q05BV3 1969 aa20.17■□□□□ 0.82
CASC3-203ENST00000418132 E7ENX8 843 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 ERGP11308 486 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 PNLIPRP1P54315 467 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 TAP2Q03519 686 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 PCDH1Q08174 1060 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 CLCA4Q14CN2 919 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 TBCCQ15814 346 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 USP39Q53GS9 565 aaKnown RBP20.16■□□□□ 0.82
CASC3-203ENST00000418132 XKR7Q5GH72 579 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 TCHHL1Q5QJ38 904 aaPredicted RBP20.16■□□□□ 0.82
CASC3-203ENST00000418132 WASH2PQ6VEQ5 465 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 SLC36A4Q6YBV0 504 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 CHSY3Q70JA7 882 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 TREML1Q86YW5 311 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 SYTL1Q8IYJ3 562 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 L3MBTL4Q8NA19 623 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 NECAB3Q96P71 396 aaPredicted RBP20.16■□□□□ 0.82
CASC3-203ENST00000418132 OR4K3Q96R72 315 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 SGPP1Q9BX95 441 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 TMEM168Q9H0V1 697 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 ZNF385DQ9H6B1 395 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 WASH6PQ9NQA3 447 aa20.16■□□□□ 0.82
CASC3-203ENST00000418132 ATP6AP2A0A1C7CYW4 349 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PDZK1P1A8MUH7 402 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 ATP6AP2O75787 350 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 LINC00032P0C843 101 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 HMOX2P30519 316 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 HOXA6P31267 233 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 TBPL1P62380 186 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 RPL6Q02878 288 aaKnown RBP20.15■□□□□ 0.82
CASC3-203ENST00000418132 ARHGAP19Q14CB8 494 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 TMEM198Q66K66 360 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 CAPN13Q6MZZ7 669 aaPredicted RBP20.15■□□□□ 0.82
CASC3-203ENST00000418132 ABRAXAS1Q6UWZ7 409 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 RNF165Q6ZSG1 346 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 HID1Q8IV36 788 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 EDAQ92838 391 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 KLHDC7BQ96G42 594 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 MENTQ9BUN1 341 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 SLC29A3Q9BZD2 475 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PRDM8Q9NQV8 689 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 AASDHPPTQ9NRN7 309 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 ARL8BQ9NVJ2 186 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PCOLCE2Q9UKZ9 415 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PRR5-ARHGAP8B1AHC4 643 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 UGDHO60701 494 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PRAMEF4O60810 478 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 RASGRP1O95267 797 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 AOC1P19801 751 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 HTR6P50406 440 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 EIF2B5Q13144 721 aaKnown RBP20.15■□□□□ 0.82
CASC3-203ENST00000418132 PRKG2Q13237 762 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 FZD2Q14332 565 aa20.15■□□□□ 0.82
CASC3-203ENST00000418132 PRAMEF9Q5VWM5 478 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms