RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PSMD7P51665 324 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 RHAGQ02094 409 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 PLEKHS1Q5SXH7 462 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 FAM180AQ6UWF9 173 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 THAP5Q7Z6K1 395 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ANKRD46Q86W74 232 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 UXS1Q8NBZ7 420 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TRPV1Q8NER1 839 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 GPATCH1Q9BRR8 931 aaKnown RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 STON1Q9Y6Q2 735 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF840PA6NDX5 716 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TSPAN6O43657 245 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ALPPP05187 535 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF8P17098 575 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-202ENST00000413872 S100GP29377 79 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 RPS6KA3P51812 740 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 RAB33AQ14088 237 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 POMZP3Q6PJE2 187 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 ISLR2Q6UXK2 745 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 NUP54Q7Z3B4 507 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 PACS2Q86VP3 889 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 LMO3Q8TAP4 145 aa16.91■□□□□ 0.3
PHRF1-202ENST00000413872 TCRBV7S3A2A0A539 114 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 BCKDKO14874 412 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 PGRMC2O15173 223 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 THRBP10828 461 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 CYP4B1P13584 511 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 OMPP47874 163 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 NXPE1Q8N323 547 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ZIM2Q9NZV7 527 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 BTBD3Q9Y2F9 522 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 MTX2O75431 263 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 AHSGP02765 367 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 CLCN7P51798 805 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 SMPD3Q9NY59 655 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 IKZF2Q9UKS7 526 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ERI3O43414 337 aaKnown RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 COQ9O75208 318 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 SEC24AO95486 1093 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 CYP11A1P05108 521 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 RPS21P63220 83 aaKnown RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 TRAP1Q12931 704 aaKnown RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ITGADQ13349 1161 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 CILP2Q8IUL8 1156 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ADAP2Q9NPF8 381 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 RHBDL2Q9NX52 303 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 KLK3P07288 261 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-202ENST00000413872 RYKP34925 604 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 PGDP52209 483 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 RIPK1Q13546 671 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 LCN1P1Q5VSP4 162 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ATCAYQ86WG3 371 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ZZZ3Q8IYH5 903 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 PRSS58Q8IYP2 241 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 ZNF527Q8NB42 609 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 KIAA1191Q96A73 305 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
PHRF1-202ENST00000413872 NME6O75414 186 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-202ENST00000413872 TIMP1P01033 207 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 HOXC12P31275 282 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 GRIA2P42262 883 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 IRF9Q00978 393 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 ZCCHC12Q6PEW1 402 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 PYCR2Q96C36 320 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 KCNS3Q9BQ31 491 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 LRRC3Q9BY71 257 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 TAC3Q9UHF0 121 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 RAPGEFL1Q9UHV5 662 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 ASNA1O43681 348 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 ARFIP1P53367 373 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 MAPK10P53779 464 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 ANO7Q6IWH7 933 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 TIFABQ6ZNK6 161 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 CDCA3Q99618 268 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-202ENST00000413872 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 TTC24A2A3L6 582 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-202ENST00000413872 CNMDO75829 334 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 GJB5O95377 273 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 RAPSNQ13702 412 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 FAM47BQ8NA70 645 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 SUN3Q8TAQ9 357 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 FAM81AQ8TBF8 368 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 S100ZQ8WXG8 99 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 DGAT2Q96PD7 388 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 PEBP4Q96S96 227 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 C8orf33Q9H7E9 229 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-202ENST00000413872 FBRSQ9HAH7 460 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 IRAK3Q9Y616 596 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 OR5F1O95221 314 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 EEFSECP57772 596 aaKnown RBP16.89■□□□□ 0.29
PHRF1-202ENST00000413872 TRIM32Q13049 653 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 MAPK11Q15759 364 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 OR10T2Q8NGX3 314 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
PHRF1-202ENST00000413872 MBLAC1A4D2B0 266 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms