RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ESRP1Q6NXG1 681 aaKnown RBP13.98□□□□□ -0.17
MINDY4-202ENST00000409881 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 NANOGNBQ7Z5D8 188 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 FAM124AQ86V42 546 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 SNX29P2Q8IUI4 249 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 SPEM1Q8N4L4 309 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 TTC30BQ8N4P2 665 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 PCYOX1LQ8NBM8 494 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 OR13C4Q8NGS5 318 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 HPS1Q92902 700 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 NXNL1Q96CM4 212 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 LYSMD1Q96S90 227 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 WRAP53Q9BUR4 548 aaKnown RBP13.98□□□□□ -0.17
MINDY4-202ENST00000409881 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
MINDY4-202ENST00000409881 AGPAT4Q9NRZ5 378 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 TMEM9Q9P0T7 183 aa13.98□□□□□ -0.17
MINDY4-202ENST00000409881 FNDC3AQ9Y2H6 1198 aaKnown RBP13.98□□□□□ -0.17
MINDY4-202ENST00000409881 MROH6A6NGR9 719 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 STX7O15400 261 aaKnown RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 SPINT1O43278 529 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 PI15O43692 258 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 LPOP22079 712 aaPredicted RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 FASP25445 335 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 OXTRP30559 389 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 OPRL1P41146 370 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 PRKAA2P54646 552 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 ELP6Q0PNE2 266 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 ATP6AP1Q15904 470 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 CDKN3Q16667 212 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 CADM3Q8N126 398 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 DHRSXQ8N5I4 330 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 OR4K2Q8NGD2 314 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 OR13F1Q8NGS4 319 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 STON2Q8WXE9 905 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 ALPK1Q96QP1 1244 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 C9orf16Q9BUW7 83 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 IFT80Q9P2H3 777 aaPredicted RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 B3GNT3Q9Y2A9 372 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 DGKBQ9Y6T7 804 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 TECTAO75443 2155 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 M0R296 226 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 GPC4O75487 556 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 NR4A1P22736 598 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 SUOXP51687 545 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 ZNF140P52738 457 aaPredicted RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 CSE1LP55060 971 aaKnown RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 OXA1LQ15070 435 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 MAGEE2Q8TD90 523 aaPredicted RBP13.97□□□□□ -0.17
MINDY4-202ENST00000409881 SNX19Q92543 992 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 RAB7BQ96AH8 199 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 EID2BQ96D98 161 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 CSF3RQ99062 836 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 GPR22Q99680 433 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 NCKAP1Q9Y2A7 1128 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 ANKRD6Q9Y2G4 727 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 PKP3Q9Y446 797 aa13.97□□□□□ -0.17
MINDY4-202ENST00000409881 BPTFQ12830 3046 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 NME4O00746 187 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 AREL1O15033 823 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 ACOX3O15254 700 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 ELFN1P0C7U0 828 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 IL10P22301 178 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 ELK4P28324 431 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 RCVRNP35243 200 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 SOX11P35716 441 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 HMGCLP35914 325 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 CAPGP40121 348 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 CYBRD1Q53TN4 286 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 DEPDC1Q5TB30 811 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 FAM45BPQ6NSW5 357 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 ZC3HC1Q86WB0 502 aaKnown RBP13.96□□□□□ -0.17
MINDY4-202ENST00000409881 OR14C36Q8NHC7 312 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 FAM45AQ8TCE6 357 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 CCDC138Q96M89 665 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 SLC25A23Q9BV35 468 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 CYP4F12Q9HCS2 524 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 PKD2L2Q9NZM6 624 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 BDP1A6H8Y1 2624 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 TTC28Q96AY4 2481 aa13.96□□□□□ -0.17
MINDY4-202ENST00000409881 ATP6AP2A0A1C7CYW4 349 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 PRR23AA6NEV1 266 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 ATP6AP2O75787 350 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 RASAL1O95294 804 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 SNAP29O95721 258 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 C1SP09871 688 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 CCT8P50990 548 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 ARSDP51689 593 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 TMBIM6P55061 237 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 YBX1P67809 324 aaKnown RBP13.96□□□□□ -0.18
MINDY4-202ENST00000409881 MPP1Q00013 466 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 KCNJ8Q15842 424 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 C8orf82Q6P1X6 216 aaPredicted RBP13.96□□□□□ -0.18
MINDY4-202ENST00000409881 RETREG3Q86VR2 466 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 DDIASQ8IXT1 998 aa13.96□□□□□ -0.18
MINDY4-202ENST00000409881 OR13J1Q8NGT2 312 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms