RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 CNTN1Q12860 1018 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 CHIT1Q13231 466 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 PWP1Q13610 501 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 BLMHQ13867 455 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 LRRC36Q1X8D7 754 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 ITPRIPL2Q3MIP1 535 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 USP39Q53GS9 565 aaKnown RBP18.83■□□□□ 0.61
LIMS2-204ENST00000409286 EGFLAMQ63HQ2 1017 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 LCN8Q6JVE9 175 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 NANOGP8Q6NSW7 305 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 SLC2A7Q6PXP3 512 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 DLEU7Q6UYE1 221 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 LIX1Q8N485 282 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 LILRA3Q8N6C8 439 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-204ENST00000409286 BTBD9Q96Q07 612 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 NR1H4Q96RI1 486 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-204ENST00000409286 EFHD1Q9BUP0 239 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 NANOGQ9H9S0 305 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 TMED5Q9Y3A6 229 aa18.83■□□□□ 0.61
LIMS2-204ENST00000409286 TCF20Q9UGU0 1960 aaKnown RBP18.83■□□□□ 0.61
LIMS2-204ENST00000409286 RFXAPO00287 272 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 NPC1O15118 1278 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PRAMEF4O60810 478 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 RNASEH2AO75792 299 aaKnown RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 MAPK1P28482 360 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PDHA2P29803 388 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 CASP2P42575 452 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 GSK3BP49841 420 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 IRF8Q02556 426 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ENPP2Q13822 863 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 GRAMD1BQ3KR37 738 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PIP5KL1Q5T9C9 394 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PRAMEF9Q5VWM5 478 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 FRG2Q64ET8 278 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ADAMTSL4Q6UY14 1074 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 CYP2R1Q6VVX0 501 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PTRH1Q86Y79 214 aaKnown RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 CFAP206Q8IYR0 622 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 KIAA2013Q8IYS2 634 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 TMEM102Q8N9M5 508 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ICA1LQ8NDH6 482 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 OR56A3Q8NH54 315 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 FRG2BQ96QU4 278 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 UHRF1Q96T88 793 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PKP4Q99569 1192 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 GMPR2Q9P2T1 348 aaKnown RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ATXN10Q9UBB4 475 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 STON1Q9Y6Q2 735 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 COL4A3Q01955 1670 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 AP1G1O43747 822 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 BCKDHAP12694 445 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 LAMP2P13473 410 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 PBLDP30039 288 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 GDI1P31150 447 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 MRPS35P82673 323 aaKnown RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 LIPEQ05469 1076 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 NAE1Q13564 534 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 TICAM1Q8IUC6 712 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 TRAPPC5Q8IUR0 188 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 SLCO4A1Q96BD0 722 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 HIC2Q96JB3 615 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 KCTD14Q9BQ13 255 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 KXD1Q9BQD3 176 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ALG2Q9H553 416 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 CLMPQ9H6B4 373 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 INTS7Q9NVH2 962 aaKnown RBP18.82■□□□□ 0.6
LIMS2-204ENST00000409286 ARMC1Q9NVT9 282 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 SLAMF8Q9P0V8 285 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 GULP1Q9UBP9 304 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 TRANK1O15050 2925 aa18.82■□□□□ 0.6
LIMS2-204ENST00000409286 C1orf105O95561 183 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 UQCRBP14927 111 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 ATP6V1B2P21281 511 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 HNF4AP41235 474 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 BDKRB1P46663 353 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 DGKQP52824 942 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 AQP4P55087 323 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 YBX1P67809 324 aaKnown RBP18.81■□□□□ 0.6
LIMS2-204ENST00000409286 INPP5AQ14642 412 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 PTGR1Q14914 329 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 RABL3Q5HYI8 236 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 CES5AQ6NT32 575 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 PARM1Q6UWI2 310 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 SUSD1Q6UWL2 747 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 TRIM74Q86UV6 250 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 SLC13A3Q8WWT9 602 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 COX14Q96I36 57 aa18.81■□□□□ 0.6
LIMS2-204ENST00000409286 TRMT61BQ9BVS5 477 aaKnown RBP18.81■□□□□ 0.6
LIMS2-204ENST00000409286 RSPH9Q9H1X1 276 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-204ENST00000409286 CNOT11Q9UKZ1 510 aaKnown RBP18.81■□□□□ 0.6
LIMS2-204ENST00000409286 KRT87PA6NCN2 255 aa18.8■□□□□ 0.6
LIMS2-204ENST00000409286 CLGNO14967 610 aa18.8■□□□□ 0.6
LIMS2-204ENST00000409286 RNASEH1O60930 286 aaKnown RBP18.8■□□□□ 0.6
LIMS2-204ENST00000409286 POP7O75817 140 aaKnown RBP18.8■□□□□ 0.6
LIMS2-204ENST00000409286 KCNH1O95259 989 aa18.8■□□□□ 0.6
LIMS2-204ENST00000409286 ZNF8P17098 575 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-204ENST00000409286 HTR1EP28566 365 aa18.8■□□□□ 0.6
LIMS2-204ENST00000409286 IMPA1P29218 277 aa18.8■□□□□ 0.6
LIMS2-204ENST00000409286 GRIA3P42263 894 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms