RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CAPN8A6NHC0 703 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 AQP12BA6NM10 295 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 H3BNX3 289 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CDC7O00311 574 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 ACOT8O14734 319 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 KPNA5O15131 536 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 DENRO43583 198 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 NDUFS2O75306 463 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 NIPSNAP2O75323 286 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SIX3O95343 332 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 MAOBP27338 520 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC7A1P30825 629 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CLCN7P51798 805 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 STARD3Q14849 445 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SETMARQ53H47 684 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SULT1C3Q6IMI6 304 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 MACC1Q6ZN28 852 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 RNF165Q6ZSG1 346 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 LYSMD3Q7Z3D4 306 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 AQP12AQ8IXF9 295 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 PIANPQ8IYJ0 282 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 TCAIMQ8N3R3 496 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 OR2AP1Q8NGE2 309 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 EEF1AKMT1Q8WVE0 214 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 POP5Q969H6 163 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 ATP6V1E2Q96A05 226 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 GBP5Q96PP8 586 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 UBL7Q96S82 380 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CPEB1Q9BZB8 566 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 RDH14Q9HBH5 336 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 SARS2Q9NP81 518 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 KCTD5Q9NXV2 234 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CD300AQ9UGN4 299 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 LEF1Q9UJU2 399 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CYP8B1Q9UNU6 501 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 AP4S1Q9Y587 144 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 GOLGA4Q13439 2230 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 BPTFQ12830 3046 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF106Q9H2Y7 1883 aaKnown RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PRSS51A0A1B0GVH4 220 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 A0A1W2PP18 115 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 E7ENX8 843 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC28A1O00337 649 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 NR5A2O00482 541 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 FBP2O00757 339 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 BNIP3LO60238 219 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 WDR47O94967 919 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PRAMEF1O95521 474 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 POP4O95707 220 aaKnown RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PRR35P0CG20 571 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 UMPSP11172 480 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 HSD17B1P14061 328 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 GNSP15586 552 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 VCLP18206 1134 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 GABRG2P18507 467 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 IL10P22301 178 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 ACRV1P26436 265 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 HMOX2P30519 316 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 NSG1P42857 185 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 RECQLP46063 649 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 MRPS22P82650 360 aaKnown RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 NFATC2Q13469 925 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 TGFBIQ15582 683 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PPP1R3AQ16821 1122 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 C8orf82Q6P1X6 216 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 Q6ZVU0 165 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 CPNE9Q8IYJ1 553 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 AADATQ8N5Z0 425 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PDPRQ8NCN5 879 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PPP3R2Q96LZ3 170 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 NSMCE3Q96MG7 304 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 CENPKQ9BS16 269 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 BRINP2Q9C0B6 783 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 PRSS16Q9NQE7 514 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 AIG1Q9NVV5 245 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
SMARCB1-203ENST00000407082 SMG1Q96Q15 3661 aaKnown RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 FAM234BA2RU67 622 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms