RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 EML2O95834 649 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 APOA4P06727 396 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 GP1BAP07359 652 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 THBS1P07996 1170 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 INHBAP08476 426 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 SLC35E2BP0CK96 405 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 CDK4P11802 303 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 F3P13726 295 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ENO3P13929 434 aaPredicted RBP8.95□□□□□ -0.98
VPS53-203ENST00000401468 ZNF37AP17032 561 aaPredicted RBP8.95□□□□□ -0.98
VPS53-203ENST00000401468 IDSP22304 550 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ALDH4A1P30038 563 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 MSH2P43246 934 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 MAP2K3P46734 347 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 FASLGP48023 281 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 LSSP48449 732 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 MAPK10P53779 464 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 TAS2R39P59534 338 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ZNF844Q08AG5 666 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 LY6DQ14210 128 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 NFE2L1Q14494 772 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 NR1D2Q14995 579 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 PHF19Q5T6S3 580 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 LRRC8EQ6NSJ5 796 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 UGT3A1Q6NUS8 523 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 IYDQ6PHW0 289 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 PCSK4Q6UW60 755 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 TMEM207Q6UWW9 146 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 CYHR1Q6ZMK1 362 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 VASH2Q86V25 355 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 VRK3Q8IV63 474 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 NAGSQ8N159 534 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 SFRP1Q8N474 314 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 GPR156Q8NFN8 814 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
VPS53-203ENST00000401468 ASZ1Q8WWH4 475 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ANKRD7Q92527 254 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ELMO1Q92556 727 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 INPP5DQ92835 1189 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 PKNOX2Q96KN3 472 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 RMDN2Q96LZ7 410 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 GPR21Q99679 349 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 NUDT22Q9BRQ3 303 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 SEMA4CQ9C0C4 833 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 CCDC68Q9H2F9 335 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 LRRN3Q9H3W5 708 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 LRIT1Q9P2V4 623 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 PSMC3IPQ9P2W1 217 aaPredicted RBP8.95□□□□□ -0.98
VPS53-203ENST00000401468 KCNK6Q9Y257 313 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 PLAAQ9Y263 795 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 WDR37Q9Y2I8 494 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 ANKRD17O75179 2603 aaKnown RBP8.95□□□□□ -0.98
VPS53-203ENST00000401468 TEX15Q9BXT5 2789 aa8.95□□□□□ -0.98
VPS53-203ENST00000401468 SPTA1P02549 2419 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 UQCRHLA0A096LP55 91 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 KIR2DS5A0A0G2JLQ3 304 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 A0A0G2JNG1 304 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 CCDC189A1A4V9 331 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 D6RAR5 112 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 E5RI56 91 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 KIR2DS3K7RE56 304 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 NTN3O00634 580 aaPredicted RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 RFPL1O75677 317 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 KRT38O76015 456 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 UQCRHP07919 91 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 SNRPAP09012 282 aaKnown RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 MPC1LP0DKB6 136 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 STMN1P16949 149 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 XRCC1P18887 633 aaPredicted RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 MSX1P28360 303 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 CRABP2P29373 138 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 RBMS1P29558 406 aaKnown RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 PDHA2P29803 388 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 SLC5A2P31639 672 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ACTR1BP42025 376 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 MAPK9P45984 424 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 RAB10P61026 200 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ACTR1AP61163 376 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 UBE2IP63279 158 aaKnown RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 KIR2DS5Q14953 304 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 CLCA4Q14CN2 919 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 TMED2Q15363 201 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ACSBG2Q5FVE4 666 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 SNAP47Q5SQN1 464 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 UNC5DQ6UXZ4 953 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 RAB11FIP2Q7L804 512 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 OTOAQ7RTW8 1153 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ZNF438Q7Z4V0 828 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 SPRED1Q7Z699 444 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 PIM3Q86V86 326 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 LCA5Q86VQ0 697 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ZFAND4Q86XD8 727 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 CFAP206Q8IYR0 622 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 ZBTB2Q8N680 514 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 SIDT2Q8NBJ9 832 aaKnown RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 FBXO15Q8NCQ5 510 aaPredicted RBP8.94□□□□□ -0.98
VPS53-203ENST00000401468 ZNF248Q8NDW4 579 aa8.94□□□□□ -0.98
VPS53-203ENST00000401468 OR2W6PQ8NHA6 318 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms