RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 BPTFQ12830 3046 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KBTBD13C9JR72 458 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM47E-STBD1D6RA91 191 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 GOLGA8TH3BQL2 631 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 LSM1O15116 133 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PSTPIP1O43586 416 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZIC2O95409 532 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 SERPINA3P01011 423 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CELA3BP08861 270 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TAC1P20366 129 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CRYBB1P53674 252 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ALDH18A1P54886 795 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 GHRHRQ02643 423 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 SRSF11Q05519 484 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 WBP2NLQ6ICG8 309 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 RGMBQ6NW40 437 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRMT10BQ6PF06 316 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRMT10CQ7L0Y3 403 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TOP6BLQ8N6T0 577 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 C12orf50Q8NA57 414 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 DTWD2Q8NBA8 298 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 RDM1Q8NG50 284 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PSMA8Q8TAA3 256 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZCCHC10Q8TBK6 192 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 GATA6Q92908 595 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 GRAMD1AQ96CP6 724 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 WDR89Q96FK6 387 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PPP1R36Q96LQ0 422 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZFP42Q96MM3 310 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CYTH2Q99418 400 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 FERMT1Q9BQL6 677 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 VCX2Q9H322 139 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PDZD7Q9H5P4 517 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 DHX35Q9H5Z1 703 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CNOT10Q9H9A5 744 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 POLR1BQ9H9Y6 1135 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 IL26Q9NPH9 171 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 GMEB2Q9UKD1 530 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 SPECC1L-ADORA2AF8WAN1 911 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CLPXO76031 633 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 UMPSP11172 480 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CDH2P19022 906 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CYP2B6P20813 491 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 KDELR1P24390 212 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 MSX2P35548 267 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SLC1A1P43005 524 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TIRAPP58753 221 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 NCALDP61601 193 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ST8SIA6P61647 398 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ELF3P78545 371 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SLC25A11Q02978 314 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CSTF3Q12996 717 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CCINQ13939 588 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TAF1BQ53T94 588 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 LIPMQ5VYY2 423 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 PARS2Q7L3T8 475 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 OFCC1Q8IZS5 231 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TMEM116Q8NCL8 245 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SLC24A4Q8NFF2 622 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TCP10LQ8TDR4 215 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 FAM172AQ8WUF8 416 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SPSB4Q96A44 273 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 FAF2Q96CS3 445 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ZNF560Q96MR9 790 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 PAFAH2Q99487 392 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 C1QTNF3Q9BXJ4 246 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CHRNA9Q9UGM1 479 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 STYXL1Q9Y6J8 313 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 LOC105371267A0A1B0GV96 52 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 MEX3AA1L020 520 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 HTR3EA5X5Y0 456 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TMEM221A6NGB7 291 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 OOEPA6NGQ2 149 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 C3orf70A6NLC5 250 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SYN3O14994 580 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CDH16O75309 829 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 NME6O75414 186 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 GABBR2O75899 941 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 OR6B1O95007 311 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ABHD16AO95870 558 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 IL1BP01584 269 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 AHSGP02765 367 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CALB1P05937 261 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 FAM58BPP0C7Q3 252 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 ZCCHC18P0CG32 403 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 PKMP14618 531 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SERPINA4P29622 427 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CETN2P41208 172 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 NDUFV1P49821 464 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 HK2P52789 917 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 SNU13P55769 128 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 NME3Q13232 169 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CTBP1Q13363 440 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 TMEM132DQ14C87 1099 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 MROH9Q5TGP6 573 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 RAET1GQ6H3X3 334 aa6.08□□□□□ -1.44
TRAPPC13-202ENST00000399438 CDHR3Q6ZTQ4 885 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms