RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 CAPN14A8MX76 684 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 HEXBP07686 556 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TTC27Q6P3X3 843 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 OSTM1Q86WC4 334 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 IRF2BP1Q8IU81 584 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
TTC28-201ENST00000397906 PLEKHG4BQ96PX9 1271 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 CYP11A1P05108 521 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 COL6A2P12110 1019 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 MTPNP58546 118 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 FOLH1Q04609 750 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 PRRT3Q5FWE3 981 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 AP3S1Q92572 193 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 KIAA1143Q96AT1 154 aaPredicted RBP11.12□□□□□ -0.63
TTC28-201ENST00000397906 IGSF21Q96ID5 467 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 HAT1O14929 419 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TGDSO95455 350 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TCF4P15884 667 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 MS4A13Q5J8X5 152 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 RGMAQ96B86 450 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TWNKQ96RR1 684 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 FZD3Q9NPG1 666 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 POP7O75817 140 aaKnown RBP11.12□□□□□ -0.63
TTC28-201ENST00000397906 NUDT17P0C025 328 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TPRG1Q6ZUI0 275 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 CCDC54Q8NEL0 328 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 SCML2Q9UQR0 700 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 FAM227AF5H4B4 570 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 GALK1P51570 392 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 TARDBPQ13148 414 aaKnown RBP eCLIP11.12□□□□□ -0.636e-7■■□□□ 14
TTC28-201ENST00000397906 PON2Q15165 354 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 LPCAT4Q643R3 524 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 SATB2Q9UPW6 733 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 AMER2Q8N7J2 671 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 CAMKVQ8NCB2 501 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 CALML5Q9NZT1 146 aa11.12□□□□□ -0.63
TTC28-201ENST00000397906 MON2Q7Z3U7 1717 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 FUT4P22083 530 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CDK9P50750 372 aaKnown RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 AMIGO1Q86WK6 493 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NUDT13Q86X67 352 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 FAM156AQ8NDB6 213 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TPSD1Q9BZJ3 242 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 ARL8BQ9NVJ2 186 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SDC3O75056 442 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 MAF1Q9H063 256 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 RC3H2Q9HBD1 1191 aaKnown RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 C1orf109Q9NX04 203 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SERTAD3Q9UJW9 196 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SHPRHQ149N8 1683 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 BCKDKO14874 412 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CHRM5P08912 532 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 IL1R2P27930 398 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 RAB8AP61006 207 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SLC2A4RGQ9NR83 387 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SLC2A6Q9UGQ3 507 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 A6NCN8 305 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 COCHO43405 550 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 PREPP48147 710 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 HCAR3P49019 387 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 EIPR1Q53HC9 387 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 AGAP11Q8TF27 550 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 ARHGEF33A8MVX0 844 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TULP3O75386 442 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CAPZA1P52907 286 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 RAB25P57735 213 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TRMT10BQ6PF06 316 aaKnown RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 MBOAT1Q6ZNC8 495 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 COMMD4Q9H0A8 199 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TBC1D17Q9HA65 648 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 NKIRAS2Q9NYR9 191 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 MUSKO15146 869 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CHST10O43529 356 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 TTLQ8NG68 377 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 MOCS1Q9NZB8 636 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 GRXCR1A8MXD5 290 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 MAGP20916 626 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 ACVR2AP27037 513 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 STK19P49842 368 aaPredicted RBP11.11□□□□□ -0.63
TTC28-201ENST00000397906 HMGCS1Q01581 520 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 DPYSL2Q16555 572 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CPNE8Q86YQ8 564 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CLDN19Q8N6F1 224 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 ZNF611Q8N823 705 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 CDH22Q9UJ99 828 aa11.11□□□□□ -0.63
TTC28-201ENST00000397906 C15orf41Q9Y2V0 281 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms