RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PDLIM5Q96HC4 596 aaKnown RBP13.6□□□□□ -0.23
NUP98-204ENST00000397004 RIBC2Q9H4K1 309 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 RASSF1Q9NS23 344 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 OSGIN1Q9UJX0 560 aa13.6□□□□□ -0.23
NUP98-204ENST00000397004 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 E5RI56 91 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 hCG_2039718K7EN88 272 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 E2F6O75461 281 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 SEMG1P04279 462 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 IGFBP5P24593 272 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 TMED10P49755 219 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 NKX2-5P52952 324 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 NCLNQ969V3 563 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 CINPQ9BW66 212 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 ATAD3AQ9NVI7 634 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 IL17CQ9P0M4 197 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ZNF490Q9ULM2 529 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 SCELO95171 688 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ADRA2AP08913 450 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 CTPS1P17812 591 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ARPP19P56211 112 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 RNF19BQ6ZMZ0 732 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 EID3Q8N140 333 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 UBA2Q9UBT2 640 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 NDRG4Q9ULP0 352 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 MYO1DO94832 1006 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 CD40LGP29965 261 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 CREMQ03060 361 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ACOX1Q15067 660 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 SF3B4Q15427 424 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■□□□□ 10.1
NUP98-204ENST00000397004 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 TSEN54Q7Z6J9 526 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 P2RY8Q86VZ1 359 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ZDHHC21Q8IVQ6 265 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 ADHFE1Q8IWW8 467 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 FAM83FQ8NEG4 500 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 LGALS12Q96DT0 336 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 DPY30Q9C005 99 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 NECTIN3Q9NQS3 549 aa13.59□□□□□ -0.23
NUP98-204ENST00000397004 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
NUP98-204ENST00000397004 A0A096LPI6 279 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 H7C0S8 307 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 M0R082 166 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 CBX4O00257 560 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 KDELR3O43731 214 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 SEC22BO75396 215 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 C21orf33P30042 268 aaPredicted RBP13.58□□□□□ -0.23
NUP98-204ENST00000397004 EIF2DP41214 584 aaKnown RBP13.58□□□□□ -0.23
NUP98-204ENST00000397004 PAGE2Q7Z2X7 111 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 SAPCD2Q86UD0 394 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 RORBQ92753 470 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 C1orf109Q9NX04 203 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 OPTCQ9UBM4 332 aa13.58□□□□□ -0.23
NUP98-204ENST00000397004 SLC22A1O15245 554 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 OTCP00480 354 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 PSMB9P28065 219 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 IFITM2Q01629 132 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 IL1RL1Q01638 556 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 ADGRG2Q8IZP9 1017 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 PHF10Q8WUB8 498 aaKnown RBP13.58□□□□□ -0.24
NUP98-204ENST00000397004 TRIB2Q92519 343 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 USP7Q93009 1102 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 DPH2Q9BQC3 489 aaPredicted RBP13.58□□□□□ -0.24
NUP98-204ENST00000397004 APOL5Q9BWW9 433 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 DSN1Q9H410 356 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 CAB39Q9Y376 341 aaPredicted RBP13.58□□□□□ -0.24
NUP98-204ENST00000397004 OR2A25A4D2G3 310 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 LRATO95237 230 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 GLUD1P00367 558 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 ESR1P03372 595 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 ZDHHC11BP0C7U3 371 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 PTGER3P43115 390 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 OCA2Q04671 838 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 LYSMD2Q8IV50 215 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 CD244Q9BZW8 370 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 GKN1Q9NS71 199 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 MANBAO00462 879 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 DSCR3O14972 297 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 ATF6P18850 670 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 MAGP20916 626 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 AKT1P31749 480 aa13.58□□□□□ -0.24
NUP98-204ENST00000397004 MAD2L1BPQ15013 274 aaPredicted RBP13.58□□□□□ -0.24
NUP98-204ENST00000397004 CXorf57Q6NSI4 855 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms