RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ABRAXAS1Q6UWZ7 409 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IZUMO2Q6UXV1 221 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CYP4X1Q8N118 509 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 METTL25Q8N6Q8 603 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DDHD1Q8NEL9 900 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OR13J1Q8NGT2 312 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OR14C36Q8NHC7 312 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NELL1Q92832 810 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PREBQ9HCU5 417 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ARL5AQ9Y689 179 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CA3P07451 260 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ATF6P18850 670 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 JAK1P23458 1154 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 EPHA5P54756 1037 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 MRPS22P82650 360 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 MYBPC3Q14896 1274 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM35AQ53FP2 167 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DGKKQ5KSL6 1271 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LINGO4Q6UY18 593 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ADGRD2Q7Z7M1 963 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DENND6BQ8NEG7 585 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LCN9Q8WX39 176 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DNASE1L2Q92874 299 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FGF13Q92913 245 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 THAP11Q96EK4 314 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RMDN2Q96LZ7 410 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 EVA1AQ9H8M9 152 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LIPT1Q9Y234 373 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ITM2BQ9Y287 266 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TCF20Q9UGU0 1960 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TCRBV7S3A2A0A539 114 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ENO4A6NNW6 628 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FOXO6A8MYZ6 492 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HOXD9P28356 352 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ACVRL1P37023 503 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HSPA7P48741 367 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NR1H2P55055 460 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM220Q6QAJ8 160 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 Q6ZVL8 140 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ADGRG2Q8IZP9 1017 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CYP4Z2PQ8N1L4 340 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SPPL2AQ8TCT8 520 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PPCDCQ96CD2 204 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TRAPPC9Q96Q05 1148 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 C1QTNF3Q9BXJ4 246 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 MEAF6Q9HAF1 191 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SEC14L3Q9UDX4 400 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LINC01553A4QN01 128 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 UBXN7O94888 489 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 APOA1P02647 267 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 BMP7P18075 431 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CD68P34810 354 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CPA2P48052 419 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 KCNC1P48547 511 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LMAN2Q12907 356 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ALG11Q2TAA5 492 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 C6orf136Q5SQH8 315 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 AGTRAPQ6RW13 159 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 USP30Q70CQ3 517 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PIK3C3Q8NEB9 887 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LRRC58Q96CX6 371 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 KCNC2Q96PR1 638 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IMP3Q9NV31 184 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 EPHA6Q9UF33 1036 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 COPG1Q9Y678 874 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CD63P08962 238 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SRCP12931 536 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CTPS1P17812 591 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 AFF1P51825 1210 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 KCNC4Q03721 635 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF678Q5SXM1 525 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 POU5F2Q8N7G0 328 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 B3GALT6Q96L58 329 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CATSPER2Q96P56 530 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 VPS35Q96QK1 796 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HERPUD2Q9BSE4 406 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TRNAU1APQ9NX07 287 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PPT2Q9UMR5 302 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NIPSNAP2O75323 286 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ENTPD5O75356 428 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FOXN2P32314 431 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HNF1BP35680 557 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SOX6P35712 828 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TNFRSF4P43489 277 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RPL5P46777 297 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 EEFSECP57772 596 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HTRA4P83105 476 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NAE1Q13564 534 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ARSIQ5FYB1 569 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IL23RQ5VWK5 629 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 VITQ6UXI7 678 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CLDN19Q8N6F1 224 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZUFSPQ96AP4 578 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ADNPQ9H2P0 1102 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CAB39LQ9H9S4 337 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SGK2Q9HBY8 427 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IL1RAPQ9NPH3 570 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms