RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 UGT3A2Q3SY77 523 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 KBTBD12Q3ZCT8 623 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 MCMDC2Q4G0Z9 681 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 BTNL8Q6UX41 500 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 PLEKHM3Q6ZWE6 761 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 PIWIL4Q7Z3Z4 852 aaKnown RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CNTN4Q8IWV2 1026 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CFAP206Q8IYR0 622 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 AMER3Q8N944 861 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 SPATA20Q8TB22 786 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 BCL2L2Q92843 193 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 SNRNP40Q96DI7 357 aaKnown RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 PHF21BQ96EK2 531 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 LINGO1Q96FE5 620 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CDCA5Q96FF9 252 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 NEURL2Q9BR09 285 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 GKN1Q9NS71 199 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 TAF1P21675 1872 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CACNA1IQ9P0X4 2223 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 E9PI62 339 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 RTCAO00442 366 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 FLRT2O43155 660 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PRSS2P07478 247 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 INHBAP08476 426 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ANKRD34CP0C6C1 535 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 HSPA8P11142 646 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 JAK1P23458 1154 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 CCND3P30281 292 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 SLC6A6P31641 620 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 SOAT1P35610 550 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 CLK1P49759 484 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PEX5P50542 639 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 FOLH1Q04609 750 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 TRAF2Q12933 501 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 IQCCQ4KMZ1 466 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ELFN2Q5R3F8 820 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 CASC4Q6P4E1 433 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZNF549Q6P9A3 640 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 IL17RELQ6ZVW7 336 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 C1QL2Q7Z5L3 287 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PIGWQ7Z7B1 504 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 KMT5CQ86Y97 462 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 MMD2Q8IY49 270 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 CLYBLQ8N0X4 340 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZNF619Q8N2I2 560 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 OR11H4Q8NGC9 324 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 IRGQQ8WZA9 623 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PROX1Q92786 737 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 HMCESQ96FZ2 354 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 FAM20AQ96MK3 541 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZNF385AQ96PM9 386 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 SRD5A3Q9H8P0 318 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 UBTD1Q9HAC8 227 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 RAB9BQ9NP90 201 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 PNPLA3Q9NST1 481 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 P4HTMQ9NXG6 502 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 VPS18Q9P253 973 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 VDAC3Q9Y277 283 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 HBS1LQ9Y450 684 aaKnown RBP4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ABCC9O60706 1549 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ACEP12821 1306 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 CGNL1Q0VF96 1302 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZNF521Q96K83 1311 aa4.7□□□□□ -1.66
HMGB1P10-201ENST00000395823 TTC3P53804 2025 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 EVPLQ92817 2033 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 A0A1W2PPW3 197 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 MAGEA13PA6NCF6 341 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 SDR42E2A6NKP2 422 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 PLOD2O00469 737 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 CTDSPLO15194 276 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 RNASEH1O60930 286 aaKnown RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 AKAP3O75969 853 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 PNPP00491 289 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 GH1P01241 217 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 CDH1P12830 882 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 CDX1P47902 265 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 FUT6P51993 359 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 KIAA1024LP59773 190 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 TUBA1BP68363 451 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 MBTD1Q05BQ5 628 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 RPS6KA1Q15418 735 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 UGP2Q16851 508 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 DUOXA1Q1HG43 343 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZNF449Q6P9G9 518 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 ANKRD33Q7Z3H0 272 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 LONP2Q86WA8 852 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 FOXP4Q8IVH2 680 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 SIAH3Q8IW03 269 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 NDUFAF2Q8N183 169 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 LILRB1Q8NHL6 650 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 RNASE8Q8TDE3 154 aaKnown RBP4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 PIGBQ92521 554 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 P2RX5Q93086 422 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 SGF29Q96ES7 293 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 C17orf77Q96MU5 243 aa4.69□□□□□ -1.66
HMGB1P10-201ENST00000395823 KLHL5Q96PQ7 755 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms