RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 KBTBD7Q8WVZ9 684 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 FBXO32Q969P5 355 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 KIFC3Q9BVG8 833 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TWSG1Q9GZX9 223 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 OR10A4Q9H209 315 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 KLK15Q9H2R5 256 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TSPY26PQ9H489 355 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 DCTPP1Q9H773 170 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 NOD2Q9HC29 1040 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TBC1D23Q9NUY8 699 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 RASAL2Q9UJF2 1139 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 APPL1Q9UKG1 709 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PCDHGB4Q9UN71 923 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 C19orf53Q9UNZ5 99 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 NAALADL1Q9UQQ1 740 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 B3GNT3Q9Y2A9 372 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CA5BQ9Y2D0 317 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 SPTY2D1-AS1A0A0U1RR47 76 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 C17orf113A0A1B0GUU1 675 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 LACTBL1A8MY62 500 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 SLC31A1O15431 190 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 CLDN3O15551 220 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PLRG1O43660 514 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 EDIL3O43854 480 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 HUS1O60921 280 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 SUN1O94901 812 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 BAG4O95429 457 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TGDSO95455 350 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 MATN4O95460 622 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 GATA3P23771 443 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 DNASE1P24855 282 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ARL3P36405 182 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PNPLA4P41247 253 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 GRIA3P42263 894 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 MATR3P43243 847 aaKnown RBP eCLIP5.34□□□□□ -1.554e-6■■■■□ 23.6
AP3S1-202ENST00000395548 PSMD8P48556 350 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PRKAA2P54646 552 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 AP2B1P63010 937 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 LRMPQ12912 555 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 FZD2Q14332 565 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM132DQ14C87 1099 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 HNRNPA1L2Q32P51 320 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 FLYWCH1Q4VC44 716 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ODF2Q5BJF6 829 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 DCAF10Q5QP82 559 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 HMBOX1Q6NT76 420 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 CWC27Q6UX04 472 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF517Q6ZMY9 492 aaPredicted RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PTAR1Q7Z6K3 402 aaPredicted RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 CPLX4Q7Z7G2 160 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM200AQ86VY9 491 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 MICU3Q86XE3 530 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PDSS2Q86YH6 399 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ADGRG5Q8IZF4 528 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 SLC22A18ASQ8N1D0 253 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 AADATQ8N5Z0 425 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 OR6Y1Q8NGX8 325 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 GOT1L1Q8NHS2 421 aaPredicted RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 KIFAP3Q92845 792 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 WBP2Q969T9 261 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 RNF125Q96EQ8 232 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 CALML4Q96GE6 196 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF560Q96MR9 790 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TWNKQ96RR1 684 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PKMYT1Q99640 499 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TIMP4Q99727 224 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 SMOQ99835 787 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TRIM54Q9BYV2 358 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ILKAPQ9H0C8 392 aaPredicted RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 PDRG1Q9NUG6 133 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 SIDT1Q9NXL6 827 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 DERAQ9Y315 318 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 CYP46A1Q9Y6A2 500 aa5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TDRD6O60522 2096 aaKnown RBP5.34□□□□□ -1.55
AP3S1-202ENST00000395548 TRIM64CA6NLI5 447 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 CCDC169A6NNP5 214 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 FOXO6A8MYZ6 492 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 INAFM1C9JVW0 142 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 E7EWF7 191 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 F8VP50 259 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 RTCAO00442 366 aaKnown RBP5.33□□□□□ -1.56
AP3S1-202ENST00000395548 BTN3A1O00481 513 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 CPNE6O95741 557 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 TK1P04183 234 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 CYP11B2P19099 503 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 POLR2EP19388 210 aaKnown RBP5.33□□□□□ -1.56
AP3S1-202ENST00000395548 MALP21145 153 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 ACAT1P24752 427 aaKnown RBP5.33□□□□□ -1.56
AP3S1-202ENST00000395548 GABRB3P28472 473 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 ATP5DP30049 168 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 ATP5C1P36542 298 aaKnown RBP5.33□□□□□ -1.56
AP3S1-202ENST00000395548 DLSTP36957 453 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 NNMTP40261 264 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 MSH2P43246 934 aa5.33□□□□□ -1.56
AP3S1-202ENST00000395548 CARSP49589 748 aaKnown RBP5.33□□□□□ -1.56
AP3S1-202ENST00000395548 SMSP52788 366 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms