RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 CXCR2P25025 360 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 MLLT6P55198 1093 aaPredicted RBP8.92□□□□□ -0.98
CDH11-202ENST00000394156 ELP6Q0PNE2 266 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 PRRT3Q5FWE3 981 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 GPRC6AQ5T6X5 926 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 EMC10Q5UCC4 262 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 MFSD5Q6N075 450 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 ZFP1Q6P2D0 407 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 C22orf39Q6P5X5 142 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
CDH11-202ENST00000394156 KCTD13Q8WZ19 329 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 EHD1Q9H4M9 534 aa8.92□□□□□ -0.98
CDH11-202ENST00000394156 PAPOLBQ9NRJ5 636 aaKnown RBP8.92□□□□□ -0.98
CDH11-202ENST00000394156 RBMX2Q9Y388 322 aaKnown RBP8.92□□□□□ -0.98
CDH11-202ENST00000394156 ARIH1Q9Y4X5 557 aaPredicted RBP8.92□□□□□ -0.98
CDH11-202ENST00000394156 H7BY64 318 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 ERI3O43414 337 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR5F1O95221 314 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CKMT2P17540 419 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CEBPBP17676 345 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 IGFBP5P24593 272 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SLC6A4P31645 630 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 RPS26P62854 115 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 NIPAL4Q0D2K0 466 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 PRKD1Q15139 912 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 IRAK1BP1Q5VVH5 260 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TMEM173Q86WV6 379 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 ZDHHC14Q8IZN3 488 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 NFKBIDQ8NI38 313 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TEX47Q8TBZ9 253 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 GPR151Q8TDV0 419 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 PRAP1Q96NZ9 151 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 RPS6KA6Q9UK32 745 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TTC3P53804 2025 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 DOCK2Q92608 1830 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 MID1O15344 667 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TSPAN6O43657 245 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 ASGR2P07307 311 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 ENGP17813 658 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 PIGFQ07326 219 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 GCNT6Q5T4J0 391 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SPATA19Q7Z5L4 167 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 LRRC49Q8IUZ0 686 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR52L1Q8NGH7 329 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 PRRG4Q9BZD6 226 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 MCUBQ9NWR8 336 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 NUDT4Q9NZJ9 180 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CROCCQ5TZA2 2017 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 A0A088AWK7 358 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 BMP1P13497 986 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 XRCC1P18887 633 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 ZNF10P21506 573 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 EDNRBP24530 442 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CLDN2P57739 230 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR4D1Q15615 310 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 INO80DQ53TQ3 878 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 TCEAL5Q5H9L2 206 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 RABL3Q5HYI8 236 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 LDLRAD1Q5T700 205 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 GPR135Q8IZ08 494 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 NLGN4XQ8N0W4 816 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 PQLC1Q8N2U9 271 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CELF5Q8N6W0 485 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 EIF1ADQ8N9N8 165 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR2T34Q8NGX1 318 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR2T3Q8NH03 318 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 RAB8BQ92930 207 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 CDADC1Q9BWV3 514 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 GPR174Q9BXC1 333 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 USP29Q9HBJ7 922 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SPATA2Q9UM82 520 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 LAMB2P55268 1798 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TNFRSF11BO00300 401 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 PCDHGA12O60330 932 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 C9P02748 559 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 DEFB110Q30KQ9 67 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 C1orf189Q5VU69 101 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SULT1C3Q6IMI6 304 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 OR4N5Q8IXE1 308 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 SLC35A5Q9BS91 424 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 RNF38Q9H0F5 515 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 EPB41L4BQ9H329 900 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 FARSBQ9NSD9 589 aaKnown RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 TMEM248Q9NWD8 314 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 OXSMQ9NWU1 459 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 LTBP3Q9NS15 1303 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 FAM159BA6NKW6 160 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 LIN7AO14910 233 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 TNFRSF1BP20333 461 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 ITGAXP20702 1163 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 PTGER3P43115 390 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 INCA1Q0VD86 236 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 GPR17Q13304 367 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 FOXR2Q6PJQ5 311 aa8.91□□□□□ -0.98
CDH11-202ENST00000394156 ZNF433Q8N7K0 673 aaPredicted RBP8.91□□□□□ -0.98
CDH11-202ENST00000394156 FOXJ1Q92949 421 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms